Hi, I'm working on getting a microarray track into our local mirror, following directions from the wiki page I was able to do so.
The coordinates I was using initially were from this file: http://www.affymetrix.com/analysis/downloads/na31/ivt/HG-U133_Plus_2.na31.annot.csv.zip But this coordinates expand very large areas, I would like to only display data for the exon areas like in "GNF Atlas 2" track, I found I could add "expDrawExons on" to activate this option, but after selecting it I still don't get the same results, so I focus my attention into getting blockCounts, blockSizes and chromStarts right, I tried to take the coordinates for the probes from affyU133Plus2 track, that didn't do the trick either ask I could see the coordinates in affyU133Plus2 and gnfAtlas2 aren't exactly the same, my last resource was to use the coordinates directly from gnfAtlas2, but that doesn't cover all of the probes we have. Is there a better way to get this right? Thanks for your help, -- Carlos Borroto Baltimore, MD _______________________________________________ Genome maillist - Genome@soe.ucsc.edu https://lists.soe.ucsc.edu/mailman/listinfo/genome
