Hi Linda, Our apologies, but the SNP track you are referencing is available only through the mirror you mentioned; it is not available at our home website http://genome.ucsc.edu/. As such, we can not offer advice on how to obtain specific data about that track. I recommend either contacting the authors of the manuscript you mentioned, or Adam Siepel at Cornell, who provides the mirror site: acs4 at cornell.edu.
I hope this information is helpful. Please feel free to contact the mail list again if you require further assistance. Best, Mary ------------------ Mary Goldman UCSC Bioinformatics Group On 6/21/11 11:37 AM, Linda Rutledge wrote: > Hello, > > A recent manuscript indicates that SNP genotyping data are available through: > http://genome-mirror.bscb.cornell.edu/cgi-bin/hgGateway see ‘‘SNPs’’ track > under the Variations and Repeats heading > Although I have managed to get the specific SNP locations and genotypes for > what seems like a single individual (e.g. Wolf Allele 1; Wolf Allele 2) what > I am trying to find are the SNP genotypes for the multiple individuals of the > population sampled in the manuscript. I am also wondering if there is > associated metadata available (eg. sample location)? Thank you. > > The name of the assembly reference is the dog genome - Broad/canFam2 > Name of track is: SNPs > location: genome wide > > Thank you for your help in this regard. > > Linda > > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
