Hey Tony, There's a good chance that your problem is that one of your maf files does not end with a blank line, which is a strange requirement of our custom track maf code that is scheduled to be fixed.
Could you confirm that all of your maf's end with a blank line, and if so, get back to us so we can look more closely at this? Brian On Wed, Jun 22, 2011 at 2:04 PM, Anthony Long <[email protected]> wrote: > To whom it concerns > > I am pasting the following links into the "add custom tracks box" > > http://wfitch.bio.uci.edu/~tdlong/test1.txt # ref + 1..12 > works > http://wfitch.bio.uci.edu/~tdlong/test2.txt # ref + 1..8,13 > works > http://wfitch.bio.uci.edu/~tdlong/test3.txt # ref + 1..13 > doesn't work > > Error track load error (track name='ct_UserTrack_3545'): > Unexpected end of file ../trash/ct//ct_genome_4625_257280.maf > > test3.txt = > http://wfitch.bio.uci.edu/~tdlong/Founder/header.maf.gz > http://wfitch.bio.uci.edu/~tdlong/Founder/X_ref.maf.gz > http://wfitch.bio.uci.edu/~tdlong/Founder/X_A1.maf.gz > http://wfitch.bio.uci.edu/~tdlong/Founder/X_A2.maf.gz > http://wfitch.bio.uci.edu/~tdlong/Founder/X_A3.maf.gz > http://wfitch.bio.uci.edu/~tdlong/Founder/X_A4.maf.gz > http://wfitch.bio.uci.edu/~tdlong/Founder/X_A5.maf.gz > http://wfitch.bio.uci.edu/~tdlong/Founder/X_A6.maf.gz > http://wfitch.bio.uci.edu/~tdlong/Founder/X_A7.maf.gz > http://wfitch.bio.uci.edu/~tdlong/Founder/X_SAM.maf.gz > http://wfitch.bio.uci.edu/~tdlong/Founder/X_B1.maf.gz > http://wfitch.bio.uci.edu/~tdlong/Founder/X_B2.maf.gz > http://wfitch.bio.uci.edu/~tdlong/Founder/X_B3.maf.gz > http://wfitch.bio.uci.edu/~tdlong/Founder/X_B4.maf.gz > http://wfitch.bio.uci.edu/~tdlong/Founder/X_B5.maf.gz > > test1.txt and test2.txt are versions of test3.txt with different > subsets of lines deleted (so this proves all the files are OK on their > own). So my experiment leads me to conclude that there is a limit as > to the amount of information I can upload in any one session (even if > this is broken into many manageable files). Is there any > documentation I can refer to? Is there any way to display data such > as these without mirroring the site? > > Thanks in advance. > > Tony > > > > > > Anthony Long > Professor, Ecology and Evolution > U.C. Irvine > 92697-2525 > Ph: 949-824-2562 > http://cstern.bio.uci.edu > > > > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
