Hello, I've corresponded a few times with the mailing list regarding my attempts to may the 44,775 probes in gnfHumanAtlas2All dataset to genes and appreciate all of the helpful responses. I have a follow-up question that I was hoping someone may be able to answer for me: Most of the probe IDs in the dataset have a format that begins with a number, followed by '_at' or '_x_at'. Through a series of merges, I have been able to map the vast majority of these probes to one (or more) genes. However, there are over 13,000 probes whose probe ID begins with 'gnf1h', followed by a number and '_at' or '_x_at' (e.g., gnf1h22472_at, gnf1h22473_x_at). I have been unsuccessful at mapping these 13,000+ probes because the IDs do not appear in any mapping set I have found. Can I assume that the characters following the 'gnf1h' correspond to the actual (more standard) probe ID and use that for mapping to genes? Thank you, Kathleen
-- Kathleen Askland, MD Assistant Professor Department of Psychiatry & Human Behavior Warren Alpert School of Medicine Brown University/Butler Hospital _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
