Hi Sigve, Here is the link to the track description page for that track on the hg19 assembly:
http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeRegTfbsClustered Scroll down a little bit and you will find a link to the table "schema" that will give you the column information. We hope this help you. If you have further questions, please contact the mailing list: [email protected]. Vanessa Kirkup Swing UCSC Genome Bioinformatics Group ---------- Forwarded message ---------- From: Sigve Nakken <[email protected]> Date: Thu, Aug 25, 2011 at 8:00 AM Subject: [Genome] wgEncodeRegTfbsClustered To: [email protected] Hi, I have trouble finding a description for how the wgEncodeRegTfbsClustered track was created and also what the different columns denote in the BED file. It is available for download, but I cannot find the track and its table description in the Table Browser. http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeRegTfbsClustered/wgEncodeRegTfbsClustered.bed.gz I have looked at both the ENCODE site and various UCSC Genome Browser sites, but cannot find any relevant info regarding the columns in the track. Could someone provide a brief description of this track? Or provide a pointer to an already existing page I have not been able to find? Sigve -- Sigve Nakken, PhD Postdoctoral Fellow, Dept. of Tumor Biology Institute for Cancer Research Oslo University Hospital, Norway phone: +4795753022 email: [email protected] _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
