Maybe you can change the default similarity parameter 0.95 to a lower number.
On Wed, Sep 7, 2011 at 9:25 PM, yuanf li <[email protected]> wrote: > Dear Genome expert: > I download liftOver to convert hg18 to hg19. I also download the file > "aplCal1ToHg19.over.chain", but when I use the command "liftOver input > aplCal1ToHg19.over.chain newFile unmapped", all are in unmapped, in fact, > it is not as that. What is the problem? > > YF Li > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome > -- ********************************************* Mingfeng Li, Ph.D. Postdoctoral Associate Department of Neurobiology Yale University School of Medicine 333 Cedar Street, SHM C-327C New Haven, CT 06510 E-mail: [email protected] Lab: (203) 785-5941 Lab website: www.sestanlab.org ********************************************* _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
