Good Morning Timothy: You may want to ask the galaxy help list about this. Galaxy may already have this dataset available. They often pre-load these gigantic datasets. It is much too large to be passing around. The gzipped file is 1.5 Gb of data.
--Hiram ----- Original Message ----- From: "Timothy Wu" <[email protected]> To: [email protected] Sent: Wednesday, September 14, 2011 1:28:39 AM Subject: Re: [Genome] Downloading EST data Hi, Because I intend to import it directly to Galaxy, I was expecting it to be downloadable via the table browser. I still do not understand the blocks I'm asking earlier. But I failed to download it via the table browser due to the size limitation, irregardless of what the answer may be. Timothy On Tue, Sep 13, 2011 at 5:30 AM, Greg Roe <[email protected]> wrote: > Hi Timothy, > > I think what you want is the complete ESTs download ( est.fa.gz) available > from our Downloads page: > > http://hgdownload.cse.ucsc.edu/goldenPath/hg19/bigZips/ > > > Feel free to contact us with any additional questions: [email protected] > > - > Greg Roe > UCSC Genome Bioinformatics Group > > > > On 9/11/11 11:02 PM, Timothy Wu wrote: > > Hi, > > I intend to obtain EST data from the Table Browser. I want to obtain the > entire collection of human EST sequences irregardless of which region it > maps to. I was offered the option to download "blocks" and "regions between > blocks". I understand blocks as the regions that gets mapped to genome. So > would checking both of these region be what I wanted? > > Timothy > _______________________________________________ > Genome maillist - > [email protected]https://lists.soe.ucsc.edu/mailman/listinfo/genome > > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
