I can see blue and red items in the displays. Which colors are missing ? --Hiram
----- Original Message ----- From: "Viren Patel" <[email protected]> To: [email protected] Sent: Friday, September 23, 2011 10:43:57 AM Subject: [Genome] Fwd: Problem displaying ISCA custom tracks I am not sure if the following message was received. -------- Original Message -------- Subject: Problem displaying ISCA custom tracks Date: Thu, 22 Sep 2011 14:25:31 -0400 From: Viren Patel <[email protected]> Reply-To: [email protected] To: [email protected] We have created several custom tracks from the ISCA CNV database for use with the UCSC Genome Browser. Prior to yesterday the tracks functioned correctly. After updating one of the tracks with new information, the new track does not display correctly. Specifically the RGB colors for the CNVs do not get displayed (screenshot_1), and clicking on a CNV shows the error in the attached screenshot (screenshot_2). The specific steps I take in creating the tracks are: 1. Create the track file in the BED Detail format 2. Sort the BED Detail file according to the instructions from bedToBigBed program sort -k1,1 -k2,2n BED_Detail > BED_Detail_Sorted 3. Generate the BigBED file bedToBigBed BED_Detail_Sorted chrom.sizes BigBED -as=ISCA_nstd37.as 4. Place the BigBED file in a web-accessible location I have no idea what I'm doing wrong since this exact procedure worked previously. I have attached some relevant files. Viren _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
