Hi, I try to install the BLAT in my computer, but I have a Error. I use Linux, Ubuntu 11.10, i686, 32-bit
First I download the last version blatSrc34 and unzip this then in the terminal I write: ~$ echo $MACHTYPE ~$ MACHTYPE=i686 ~$ export MACHTYPE=i686 ~$ echo $MACHTYPE ~$ i686 Then I created the $MACHTYPE in /usr/local/bin ( my "echo $PATH" is: /usr/lib/lightdm/lightdm:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games) And finally I enter on my blatSrc and type ~$ make And the Error in the terminal: dnl@DNL-LAPTOP:~/Genetics/Tools/BLAT/blatSrc$ make cd lib && make make[1]: Entering directory `/home/dnl/Genetics/Tools/BLAT/blatSrc/lib' gcc -O -D_FILE_OFFSET_BITS=64 -D_LARGEFILE_SOURCE -D_GNU_SOURCE -DMACHTYPE_i686 -DJK_WARN -Wall -Werror -I../inc -I../../inc -I../../../inc -I../../../../inc -I../../../../../inc -o chainBlock.o -c chainBlock.c chainBlock.c: In function ‘findBestPredecessors’: chainBlock.c:290:16: error: variable ‘bestLeaf’ set but not used [-Werror=unused-but-set-variable] cc1: all warnings being treated as errors make[1]: *** [chainBlock.o] Error 1 make[1]: Leaving directory `/home/dnl/Genetics/Tools/BLAT/blatSrc/lib' make: *** [all] Error 2 Any help would be appreciated! Thanks Daniel Fernández _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
