Good Morning Ian:

The SGD has removed the 2micron sequence from the release of the yeast genome.

http://www.yeastgenome.org/

It is a matter of debate there, but this is the state for now.

--Hiram

Ian Donaldson wrote:
> Is there a reason why the 2micron sequence has not been included on the 
> sacCer3 sequence download or browser?
> 
> It is need for yeast NGS read mapping, so is it the intention that the 
> sequence from sacCer2 should be used?
> 
> Thanks,
> Ian
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