Hello, Is there a way for a tracks hub bigWig or ucsc browser mirror bigWig to determine the autoScale lower and upper limits AFTER forced (more data points within a pixel) or enforced (smoothingWindow=on, windowingFunction=mean) windowing? When viewing a bigWig for an entire chromosome, it appears that the upper and lower limits are determined from the data before the values for the windowed data points are calculated, causing it to assign upper and lower limits to the highest and lowest values of the data set. This squishes the windowed data into a narrow vertical space, forcing the user to guesstimate appropriate viewlimits and forcing the user to change it at different zooming scales. I know mean+whiskers resolves this to a degree, but is not always an ideal windowing function.
Also, is there a way for a multiwig subtrack to be turned OFF by default, and allow the user to turn it on in the parent's configuraton page? Thanks, Dan _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
