Dear UCSC　genome browser staff:
I would like to extract the coordinates of different human genomic region. I used the Ensemble gene tract to extract the coordinates for exon,intron,UTRs. Firstly, I download the sorted start and end positions for all the ensemble transcript and thought that each intergenic region should be from the end position of one transcript to the start of the followed gene. But I found there are lots of transcript are actually from the same gene and they have lots of overlapping. So I couldn't do in this way. Is there any suggestion to get the whole genome intergenic coordinates? Thank you. Jia Zeng _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
