Hi Pierre, You can browser our source code without downloading it here: http://genome-source.cse.ucsc.edu/gitweb/?p=kent.git;a=tree
The best way to notify us of a possible bug is via this mailing list ([email protected]). For suspected bugs regarding mirroring the browser, use the mirror mailing list ([email protected]). One of our engineers has provided feedback regarding your two concerns: * in 'src/hg/lib/liftOver.c' liftOverRemapRange alloc some memory (cloneString) but it is not released at the end of the caller, 'liftOverGff' We are concerned with memory leaks in critical loops, but there are many other memory leaks that we don't worry about. * compiling crash when it tries to install something in a protected apache directory You need to have permissions to write in the Apache hierarchy, htdocs and cgi-bin directories. It will not work if you attempt to run 'sudo make install' (as you would normally do for ordinary open source projects) because our source build requires a number of shell environment variables which do not survive the transition to the new sudo shell. Therefore, our recommended method of installation is to 'chown <userName>' for the apache htdocs and cgi-bin directories and then run our 'make install' since you own the directories. Please contact the mail list ([email protected]) again if you have any further questions. Katrina Learned UCSC Genome Bioinformatics Group On 10/28/11 12:01 PM, Pierre LINDENBAUM wrote: > Hi the UCSC team, > > I'm currently playing with your C sources provided at > git://genome-source.cse.ucsc.edu/kent.git > > * is there any public web site where I can browse the sources without > downloading this big package (200Mo...) , for example if I want to discuss > a source with a contact. > > * what is the best way to suggest a possible bug ? for example in > 'src/hg/lib/liftOver.c' liftOverRemapRange alloc some memory ( > cloneString) but it is not released at the end of the caller, > 'liftOverGff' > > * compiling crash when it tries to install something in a protected apache > directory > > * ... > > thanks, > > Pierre Lindenbaum > @yokofakun > > > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
