Hi Pauline. Thanks for the reply.
I still don't understand, though. In the UCSC genome browser, there are THOUSANDS of "UCSC genes" and "Refseq genes" on chromosome 1, which can be visualized in squish. If you try to view them in pack, it forces you into squish. Why can't I get the same configuration on my local installation? Thanks, Dan On Mon, Nov 7, 2011 at 4:22 PM, Pauline Fujita <[email protected]> wrote: > Hello Dan, > > There is no "maximum number of items" setting for squish, but you might > try increasing the maxItems setting for your gene track and see if that > fixes your issue. > > If you are still having trouble please feel free to contact the mailing > list again. > > Best regards, > > Pauline Fujita > UCSC Genome Bioinformatics Group > http://genome.ucsc.edu > > > On 11/5/11 7:35 AM, [email protected] wrote: > >> In UCSC's human genome browser, you can view a whole chromosome's worth of >> genes in squish. On my installation, however, attempting to load the same >> number of genes in squish fails, and the browser forces dense mode. >> maxItems does not appear to be suitable to fix this, because maxItems >> applied to pack and full also. How can I increase the number of items I >> can >> view in squish, but keep the same maxItems for pack/full at 250? >> >> Thanks, >> >> Dan >> ______________________________**_________________ >> Genome maillist - [email protected] >> https://lists.soe.ucsc.edu/**mailman/listinfo/genome<https://lists.soe.ucsc.edu/mailman/listinfo/genome> >> > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
