On Thursday, November 17, 2011 04:32:37 AM 柳城 wrote: > Hi, > > I have check the "refGene" in hg19, mm9 and rn4, and found a strange > problem, > > "txStart" always one less than actual "Transcription start position" > when the strand is "+", but it is correct when the strand is '-'. > why??
Please see: http://genome.ucsc.edu/FAQ/FAQtracks.html#tracks1 -- Ivan Adzhubey, Ph.D. Instructor Genetics Division, Brigham & Women's Hospital Harvard Medical School HMS New Research Building, Room 0464C 77 Avenue Louis Pasteur Boston, MA 02115 tel.: (617) 525-4728 fax: (617) 525-4705 web: http://genetics.bwh.harvard.edu/genetics/members/Ivan_Adzhubey.html _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
