Hi Santiago, Please refer to the following help pages where you can find most of the wig (and bigWig) controls: http://genome.ucsc.edu/goldenPath/help/wiggle.html http://genome.ucsc.edu/goldenPath/help/bigWig.html http://genome.ucsc.edu/goldenPath/help/customTrack.html#TRACK
Please contact us again at [email protected] if you have any further questions. --- Luvina Guruvadoo UCSC Genome Bioinformatics Group On 12/16/2011 9:38 AM, Santiago A. Rodriguez-Segui wrote: > Hello, > > My name is Santiago Rodriguez. I am a postdoc at the lab of Jorge > Ferrer, in Barcelona, Spain. We have recently installed a version of the > genome browser at our local server, and we are uploading bigwig files to > it by copying the following command in the "Paste URLs or data" window > at the "manage custom tracks" menu: > > track type=bigWig name="FOXA2_APProg.1_RPKM" > bigDataUrl=http://usersesion@server/folder/sample.bw visibility=2 > color=70,130,180 > > I wanted to ask you if there is a possibility of including within this > command line, the instructions to set the track controls for "vertical > viewing range", "Data view scaling", "Windowing function" and "Smoothing > window". Thank you very much in advance for your response. > > Best regards, > > Santiago > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
