Hello, Xiaobo. We don't currently support the HuRef1 assembly, so there is no liftOver file for it. You may consider turning on the Genome Variants track in your region of interest. There are several genomes represented in that track including J. Craig Venter's (HuRef1).
You can also find the J. Craig Venter assembly file at http://hgdownload-test.cse.ucsc.edu/goldenPath/venter1/bigZips/. Please contact us again at [email protected] if you have any further questions. --- Steve Heitner UCSC Genome Bioinformatics Group -----Original Message----- From: [email protected] [mailto:[email protected]] On Behalf Of Guo, Xiaobo Sent: Tuesday, January 17, 2012 5:12 PM To: [email protected] Subject: [Genome] Ask for the assembly file! Dear: Recently, i want to change the location of gene from "GRCh37.p5" to "HuRef Primary Assembly". But i can't find the assembly conversion file in the website http://hgdownload.cse.ucsc.edu/goldenPath/hg19/liftOver/?C=D;O=A. Could you send the corresponding assembly file to me. I appreciate it very much if you can afford me such file. Best, Xiaobo! _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
