Hi Alberto, It looks like our documentation of options on this page: http://genome.ucsc.edu/goldenPath/help/wiggle.html is a little bit out of date. We have made a note of that and will get the page updated soon. In the meantime, the windowing and transforming function settings are:
windowingFunction maximum|mean|minimum|mean+whiskers # default is mean transformFunc NONE|LOG # default is NONE You can also see more available settings in our source tree, here: http://genome-source.cse.ucsc.edu/gitweb/?p=kent.git;a=blob;f=src/hg/makeDb/trackDb/README;hb=HEAD (scroll down to "14. type wig") If you have further questions, please contact us again at [email protected]. -- Brooke Rhead UCSC Genome Bioinformatics Group On 2/6/12 7:22 AM, Alberto Ronchi wrote: > Hi, i'm writing because i can't find a way to add information about > the windowing function or the transforming function for a custom > track specified in a meta-custom-track file, which is then loaded > with hgt.customText= option. Anyone can help? Thanks a lot > > Alberto _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
