Hello, John. I believe you are referring to this site: http://phaseolusgenes.bioinformatics.ucdavis.edu/. If that is correct, you will find the appropriate contact information at the bottom right corner of that page.
--- Steve Heitner UCSC Genome Bioinformatics Group -----Original Message----- From: [email protected] [mailto:[email protected]] On Behalf Of [email protected] Sent: Wednesday, February 15, 2012 7:38 AM To: [email protected] Subject: [Genome] use of gmax and Pv assemblies Importance: High Dear madam, sir, After attending the BIC-meeting late 2011 we would like to use the phaseolusgenes site for making amplicons in regions of interest to test in our own breeding material. The site is linked to the glycine max built and the Phaseolus alignments is one of the tracks. We would like to look at regions with rust resistance genes. !@ sequences appear in the phaseolusgenes. It is not clear how we can relate these to their map location in the G.max genome browser since there is no blat function. What would be the best way to proceed? Do we need to download the G.max or Pv. scaffolds ourselves? I hope you can be of help. I will attach a list of known scar markers for rust resistance. Sincerely and kind regards, John Groenendijk Wageningen University/Greenacres. _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
