Hello, Bogdan,
You can find the mouse homologues in the table, hg19.mmBlastTab.
regards,
--b0b kuhn
ucsc genome bioinformatics group
On 3/15/2012 4:26 PM, Bogdan Tanasa wrote:
> Dear Pauline,
>
>
> I would really appreciate if I could have a table of orthologues : Human
> gene (UCSC gene name) - Mouse gene (UCSC gene name).
> Any suggestion would be greatly appreciated. thanks a lot,
>
> Bogdan
>
> On Thu, Mar 15, 2012 at 2:19 PM, Pauline Fujita<[email protected]>wrote:
>
>> Hello Bogdan,
>>
>> The TransMap track may be of interest to you. Please see this previously
>> answered mailing list question for more information on how to use this
>> track to extract homologs:
>>
>> https://lists.soe.ucsc.edu/**pipermail/genome/2008-July/**016784.html<https://lists.soe.ucsc.edu/pipermail/genome/2008-July/016784.html>
>>
>> Note that the reply above pertains to human-orangutan homologs but the
>> process should be similar for human-mouse.
>>
>> Best regards,
>>
>> Pauline Fujita
>> UCSC Genome Bioinformatics Group
>> http://genome.ucsc.edu
>>
>>
>>
>> On 3/13/12 4:44 PM, Bogdan Tanasa wrote:
>>
>>> Dear all,
>>>
>>> please could you advise on a way to retrieve the list of homologue genes
>>> between human and mouse.
>>>
>>> thanks,
>>>
>>> -- Bogdan
>>> ______________________________**_________________
>>> Genome maillist - [email protected]
>>> https://lists.soe.ucsc.edu/**mailman/listinfo/genome<https://lists.soe.ucsc.edu/mailman/listinfo/genome>
>>>
> _______________________________________________
> Genome maillist - [email protected]
> https://lists.soe.ucsc.edu/mailman/listinfo/genome
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