Hi, It says on https://cgwb.nci.nih.gov/goldenPath/help/hgTracksHelp.html,
"When the number of lines within a requested track location exceeds 250, the track automatically defaults to a more tightly-packed display mode. In this situation, you can restore the track display to full mode by narrowing the chromosomal range displayed or by using a track filter to reduce the number of items displayed." In bam flle where the sequencing depth is high, it is likely to have more 250 reads in a locus. Therefore, no matter how narrow the chrom range is selected, there will be more than 250 reads. Does anybody know how to filter a bam track? -- Regards, Peng _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
