Hi Peng, The Gene search box is only supposed to come up with one match, which I believe finds the match on the lowest chrom. We may change that in the future. But if you want to see all the results, use the search/position box.
Please let us know if you have any additional questions: [email protected] - Greg Roe UCSC Genome Bioinformatics Group On 4/29/12 10:13 AM, Peng Yu wrote: > Hi, > > Vmn1r100 is mapped to the following two loci based on the mysql db. > But when I type Vmn1r100 in the "gene" box, it only shows one locus (I > know that "position/search" can return two loci). Should special care > be taken to make sure "gene" box returns two loci? > > +------------+------------+-------+--------+----------+----------+----------+----------+-----------+------------+-----------+--------------+------------+ > | geneSymbol | name | chrom | strand | txStart | txEnd | > cdsStart | cdsEnd | exonCount | exonStarts | exonEnds | proteinID > | alignID | > +------------+------------+-------+--------+----------+----------+----------+----------+-----------+------------+-----------+--------------+------------+ > | Vmn1r100 | uc012fbx.1 | chr7 | + | 21003290 | 21004214 | > 21003290 | 21004214 | 1 | 21003290, | 21004214, | > NP_001160316 | uc012fbx.1 | > | Vmn1r100 | uc009foa.1 | chr7 | + | 23197249 | 23199687 | > 23198601 | 23199525 | 1 | 23197249, | 23199687, | > NP_001160316 | uc009foa.1 | > +------------+------------+-------+--------+----------+----------+----------+----------+-----------+------------+-----------+--------------+------------+ > > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
