On Mon, May 7, 2012 at 6:04 PM, Greg Roe <[email protected]> wrote: > Hi Peng, > > This is not a bug. If you click on the Muc19/smgc gene in the browser there > is some information about it on the details page. If you scroll down the > page and follow the RefSeq link, and then the RefSeq link on the subsequent > page, you'll be brought to the correct place in Genbank.
When I click the Muc19/smgc gene, I get to this page. http://genome.ucsc.edu/cgi-bin/hgGene?hgg_gene=uc011zxy.1&hgg_prot=D7RV82&hgg_chrom=chr15&hgg_start=91668756&hgg_end=91681089&hgg_type=knownGene&db=mm9&hgsid=264444213 The link under "RefSeq Accession: NM_198927" is http://genome.ucsc.edu/cgi-bin/hgc?hgsid=264444213&g=refGene&i=NM_198927&c=chr15&o=91668756&l=91668756&r=91681089&db=mm9 On this page, I see " RefSeq Gene Smgc RefSeq: NM_198927.3 Status: Provisional Description: Mus musculus submandibular gland protein C (Smgc), mRNA. CCDS: CCDS27762.1 Entrez Gene: 223809 PubMed on Gene: Smgc PubMed on Product: submandibular gland protein C precursor Stanford SOURCE: NM_198927" Would you please show me how you got to the Genbank page? > Also, a quick Google search for "Muc19 smgc" turns up quite a few relevant > pages on the topic. In summary, "[...] analyses indicate transcripts for > Muc19 and Smgc (submandibular gland protein C) are splice variants of a > larger gene, Muc19/Smgc." On the browser, I see several Muc19 UCSC knownGenes and several Smgc knowGenes. If the name Muc19/Smgc is correctly, why not these genes are not named as Muc19/Smgc? -- Regards, Peng _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
