Hi Intikhab, Take a look at the methods section for the dm3 Conservation track: http://genome.ucsc.edu/cgi-bin/hgTrackUi?c=chr2L&g=multiz15way&db=dm3
There's nothing to extract, per se, as the only data there is insect data. Creating the conservation track requires several steps and tools to build. Some more detailed relevant info can be found here, if you decide you want to build a track yourself: http://genomewiki.ucsc.edu/index.php/Whole_genome_alignment_howto Please let us know if you have any additional questions: [email protected] - Greg Roe UCSC Genome Bioinformatics Group On 5/28/12 8:41 AM, Dr. Intikhab Alam wrote: > Hi, > > We are very much interested in using Drosophila Genome and its conservation > to other species. At UCSC we see Drosophila conservation 15 species (15way) > conservation scores/tracks, is it possible to extract conservation data for > species other than insects e.g. editing the BED files or PhastCons files? > If yes, what would be the best way. > > Best wishes, > > Intikhab > _______________________________________________ > Genome maillist - [email protected] > https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
