Hi Diego, I am not able to help interpret the values in the track. I suggest emailing the contact person for the labs that contributed the data track: Anshul Kundaje ([email protected]).
-- Brooke Rhead UCSC Genome Bioinformatics Group On 6/1/12 3:59 PM, Diego Pereira wrote: > Thank you Brooke. > But as you can notice I already read the documentation, and I still > don't know how can I interpret those values. > Do you know how to interpret them? > > 2012/6/1 Brooke Rhead <[email protected] <mailto:[email protected]>> > > Hi Diego, > > Further down on that page > (http://genome.ucsc.edu/cgi-__bin/hgTrackUi?db=hg19&g=__wgEncodeSydhNsome > <http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=hg19&g=wgEncodeSydhNsome>), > in the "Methods" section, there is more information about the signal > values. See the sentence that starts with "Nucleosome density > signal maps (bedgraph and bigwig files) were generated by first > shifting reads . . ." > > There is also a contact person listed in the "Credits" section who > could likely provide more details. > > -- > Brooke Rhead > UCSC Genome Bioinformatics Group > > > > On 5/31/12 11:00 PM, Diego Pereira wrote: > > Dear all, > > Can somebody explain what does the signal values in the > wgEncodeSydhNsome > track mean? > > The documentation just says: > > [QUOTE] > *Signal*Density graph (wiggle) of signal enrichment based on > processed > > data. Signals displayed in this track are the results of pooled > replicates. > [/QUOTE] > > Probably I'm missing something... > > Thanks in advance, > > Diego > _________________________________________________ > Genome maillist - [email protected] <mailto:[email protected]> > https://lists.soe.ucsc.edu/__mailman/listinfo/genome > <https://lists.soe.ucsc.edu/mailman/listinfo/genome> > > _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
