Hello, Aritra. Please see the following previously-answered mailing list question: https://lists.soe.ucsc.edu/pipermail/genome/2010-March/021496.html
The answer refers to hg18 files, but the files referenced are also available for hg19. The equivalent hg19 links would be: http://hgdownload.cse.ucsc.edu/goldenPath/hg19/database/knownGeneMrna.txt.gz ftp://hgdownload.cse.ucsc.edu/goldenPath/hg19/database/knownGeneMrna.txt.gz http://hgdownload.cse.ucsc.edu/goldenPath/hg19/bigZips/refMrna.fa.gz Please contact us again at [email protected] if you have any further questions. --- Steve Heitner UCSC Genome Bioinformatics Group -----Original Message----- From: [email protected] [mailto:[email protected]] On Behalf Of Aritra Deb Sent: Tuesday, June 05, 2012 12:47 PM To: [email protected] Subject: [Genome] How to download cDNA from UCSC Hello, I need to download the chromosome wise total cDNA list. Is it possible to download this from UCSC? Please reply soon. Thanks. Aritra _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome _______________________________________________ Genome maillist - [email protected] https://lists.soe.ucsc.edu/mailman/listinfo/genome
