commit: 110f22be13b12841f90ced975338c94acbef49f7
Author: Horea Christian <chr <AT> chymera <DOT> eu>
AuthorDate: Fri Feb 14 13:16:45 2025 +0000
Commit: Horea Christian <horea.christ <AT> gmail <DOT> com>
CommitDate: Fri Feb 14 13:16:45 2025 +0000
URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=110f22be
sci-libs/gdcm: version and revbump
updated PYTHON_COMPAT, marked tests as failing
Signed-off-by: Horea Christian <chr <AT> chymera.eu>
sci-libs/gdcm/gdcm-3.0.14-r1.ebuild | 125 +++++++++++++++++++++++++++++++++++
sci-libs/gdcm/gdcm-3.0.24.ebuild | 126 ++++++++++++++++++++++++++++++++++++
2 files changed, 251 insertions(+)
diff --git a/sci-libs/gdcm/gdcm-3.0.14-r1.ebuild
b/sci-libs/gdcm/gdcm-3.0.14-r1.ebuild
new file mode 100644
index 000000000..8b2fc2cba
--- /dev/null
+++ b/sci-libs/gdcm/gdcm-3.0.14-r1.ebuild
@@ -0,0 +1,125 @@
+# Copyright 2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_{10..12} )
+
+inherit cmake flag-o-matic python-single-r1
+
+DESCRIPTION="Cross-platform DICOM implementation"
+HOMEPAGE="http://gdcm.sourceforge.net/";
+SRC_URI="https://downloads.sourceforge.net/gdcm/${P}.tar.bz2
+ test? ( https://downloads.sourceforge.net/gdcm/gdcmData.tar.gz )"
+# 3.0.14: .bz2 is broken, should be checked in next release
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="doc python test vtk"
+# Tests fail https://bugs.gentoo.org/948517
+RESTRICT="test"
+
+DEPEND="
+ app-text/poppler:0=[cxx]
+ dev-libs/expat:0=
+ dev-libs/json-c:0=
+ dev-libs/libxml2:2=
+ dev-libs/openssl:0=
+ >=media-libs/charls-2.0.0:0=
+ >=media-libs/openjpeg-2.0.0:2=
+ sys-apps/util-linux:0=
+ sys-libs/zlib:0=
+ python? ( ${PYTHON_DEPS} )
+ vtk? (
+ sci-libs/vtk[rendering]
+ python? (
+ sci-libs/vtk[python,${PYTHON_SINGLE_USEDEP}]
+ )
+ )
+"
+RDEPEND="${DEPEND}"
+BDEPEND="
+ dev-libs/libxslt
+ app-text/docbook-xsl-ns-stylesheets
+ doc? ( app-text/doxygen[dot] )
+ python? (
+ ${PYTHON_DEPS}
+ >=dev-lang/swig-3.0.7
+ )"
+
+REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )"
+
+PATCHES=(
+ "${FILESDIR}/gdcm_support_vtk9.patch"
+ "${FILESDIR}/gdcm-3.0.14-include-math-h.patch"
+)
+
+pkg_setup() {
+ use python && python-single-r1_pkg_setup
+}
+
+src_prepare() {
+ # drop unbundled libs
+ local -a DROPS=( gdcmcharls gdcmexpat gdcmopenjpeg gdcmuuid gdcmzlib
getopt pvrg KWStyle Release )
+ local x
+ for x in "${DROPS[@]}"; do
+ ebegin "Dropping bundled ${x#gdcm}"
+ rm -r "Utilities/${x}" || die
+ sed -i "s,^[
\t]*APPEND_COPYRIGHT(\\\${CMAKE_CURRENT_SOURCE_DIR}/${x}/,#&,"
"Utilities/CMakeLists.txt" || die
+ eend $?
+ done
+ find Utilities -mindepth 1 -maxdepth 1 '!' -name doxygen '!' -name VTK
-type d \
+ -exec ewarn "Using bundled" {} ';' || die
+
+ # fix charls include case
+ sed -i 's:CharLS/charls\.h:charls/charls.h:' CMake/FindCharLS.cmake
Utilities/gdcm_charls.h || die
+ sed -i 's:NAMES CharLS:NAMES charls:' CMake/FindCharLS.cmake || die
+
+ # Use prefixed socket++ (to avoid potential conflicts)
+ sed -i '/target_link_libraries(/s/socketxx/gdcm&/' \
+ Source/MessageExchangeDefinition/CMakeLists.txt \
+ Applications/Cxx/CMakeLists.txt \
+ || die
+
+ append-cxxflags -std=gnu++20
+ cmake_src_prepare
+}
+
+src_configure() {
+ local mycmakeargs=(
+ $(usex doc "-DGDCM_PDF_DOCUMENTATION=OFF" "")
+ $(usex python "-DGDCM_DEFAULT_PYTHON_VERSION=${EPYTHON#python}"
"")
+ -DBUILD_SHARED_LIBS=OFF
+ -DCMAKE_SKIP_RPATH=ON
+ -DGDCM_BUILD_APPLICATIONS=ON
+ -DGDCM_BUILD_EXAMPLES=OFF
+ -DGDCM_BUILD_SHARED_LIBS=ON
+ -DGDCM_BUILD_TESTING=$(usex test)
+ -DGDCM_DATA_ROOT="${WORKDIR}/gdcmData"
+ -DGDCM_DOCUMENTATION=$(usex doc)
+ -DGDCM_INSTALL_DOC_DIR="share/doc/${P}"
+ -DGDCM_INSTALL_LIB_DIR="$(get_libdir)"
+ -DGDCM_INSTALL_PYTHONMODULE_DIR="lib/${EPYTHON}/site-packages"
+ -DGDCM_USE_SYSTEM_CHARLS=ON
+ -DGDCM_USE_SYSTEM_EXPAT=ON
+ -DGDCM_USE_SYSTEM_JSON=ON
+ -DGDCM_USE_SYSTEM_LIBXML2=ON
+ -DGDCM_USE_SYSTEM_LJPEG=OFF
+ -DGDCM_USE_SYSTEM_OPENJPEG=ON
+ -DGDCM_USE_SYSTEM_OPENSSL=ON
+ -DGDCM_USE_SYSTEM_PAPYRUS3=OFF
+ -DGDCM_USE_SYSTEM_POPPLER=ON
+ -DGDCM_USE_SYSTEM_SOCKETXX=OFF
+ -DGDCM_USE_SYSTEM_UUID=ON
+ -DGDCM_USE_SYSTEM_ZLIB=ON
+ -DGDCM_USE_VTK=$(usex vtk)
+ -DGDCM_WRAP_CSHARP=OFF
+ -DGDCM_WRAP_JAVA=OFF
+ -DGDCM_WRAP_PERL=OFF
+ -DGDCM_WRAP_PHP=OFF
+ -DGDCM_WRAP_PYTHON=$(usex python)
+ -DSOCKETXX_NAMESPACE=GDCMSOCKETXX
+ )
+ cmake_src_configure
+}
diff --git a/sci-libs/gdcm/gdcm-3.0.24.ebuild b/sci-libs/gdcm/gdcm-3.0.24.ebuild
new file mode 100644
index 000000000..2813a8e16
--- /dev/null
+++ b/sci-libs/gdcm/gdcm-3.0.24.ebuild
@@ -0,0 +1,126 @@
+# Copyright 2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=8
+
+PYTHON_COMPAT=( python3_{10..12} )
+
+inherit cmake flag-o-matic python-single-r1
+
+DESCRIPTION="Cross-platform DICOM implementation"
+HOMEPAGE="http://gdcm.sourceforge.net/";
+SRC_URI="https://downloads.sourceforge.net/gdcm/${P}.tar.bz2
+ test? ( https://downloads.sourceforge.net/gdcm/gdcmData.tar.gz )"
+# 3.0.24: .bz2 is still broken, should be checked again next release
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE="doc python test vtk"
+# Tests fail https://bugs.gentoo.org/948517
+RESTRICT="test"
+
+DEPEND="
+ app-text/poppler:0=[cxx]
+ dev-libs/expat:0=
+ dev-libs/json-c:0=
+ dev-libs/libxml2:2=
+ dev-libs/openssl:0=
+ >=media-libs/charls-2.0.0:0=
+ >=media-libs/openjpeg-2.0.0:2=
+ sys-apps/util-linux:0=
+ sys-libs/zlib:0=
+ python? ( ${PYTHON_DEPS} )
+ vtk? (
+ sci-libs/vtk[rendering]
+ python? (
+ sci-libs/vtk[python,${PYTHON_SINGLE_USEDEP}]
+ )
+ )
+"
+RDEPEND="${DEPEND}"
+BDEPEND="
+ dev-libs/libxslt
+ app-text/docbook-xsl-ns-stylesheets
+ doc? ( app-text/doxygen[dot] )
+ python? (
+ ${PYTHON_DEPS}
+ dev-lang/swig
+ )"
+
+REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )"
+
+#PATCHES=(
+# "${FILESDIR}/gdcm_support_vtk9.patch"
+# "${FILESDIR}/gdcm-3.0.14-include-math-h.patch"
+#)
+
+pkg_setup() {
+ use python && python-single-r1_pkg_setup
+}
+
+src_prepare() {
+ # drop unbundled libs
+ local -a DROPS=( gdcmcharls gdcmexpat gdcmopenjpeg gdcmuuid gdcmzlib
getopt pvrg KWStyle Release )
+ local x
+ for x in "${DROPS[@]}"; do
+ ebegin "Dropping bundled ${x#gdcm}"
+ rm -r "Utilities/${x}" || die
+ sed -i "s,^[
\t]*APPEND_COPYRIGHT(\\\${CMAKE_CURRENT_SOURCE_DIR}/${x}/,#&,"
"Utilities/CMakeLists.txt" || die
+ eend $?
+ done
+ find Utilities -mindepth 1 -maxdepth 1 '!' -name doxygen '!' -name VTK
-type d \
+ -exec ewarn "Using bundled" {} ';' || die
+
+ # fix charls include case
+ #sed -i 's:CharLS/charls\.h:charls/charls.h:' CMake/FindCharLS.cmake
Utilities/gdcm_charls.h || die
+ #sed -i 's:NAMES CharLS:NAMES charls:' CMake/FindCharLS.cmake || die
+
+ # Use prefixed socket++ (to avoid potential conflicts)
+ sed -i '/target_link_libraries(/s/socketxx/gdcm&/' \
+ Source/MessageExchangeDefinition/CMakeLists.txt \
+ Applications/Cxx/CMakeLists.txt \
+ || die
+
+ append-cxxflags "-std=gnu++20"
+
+ cmake_src_prepare
+}
+
+src_configure() {
+ local mycmakeargs=(
+ $(usex doc "-DGDCM_PDF_DOCUMENTATION=OFF" "")
+ $(usex python "-DGDCM_DEFAULT_PYTHON_VERSION=${EPYTHON#python}"
"")
+ -DBUILD_SHARED_LIBS=OFF
+ -DCMAKE_SKIP_RPATH=ON
+ -DGDCM_BUILD_APPLICATIONS=ON
+ -DGDCM_BUILD_EXAMPLES=OFF
+ -DGDCM_BUILD_SHARED_LIBS=ON
+ -DGDCM_BUILD_TESTING=$(usex test)
+ -DGDCM_DATA_ROOT="${WORKDIR}/gdcmData"
+ -DGDCM_DOCUMENTATION=$(usex doc)
+ -DGDCM_INSTALL_DOC_DIR="share/doc/${P}"
+ -DGDCM_INSTALL_LIB_DIR="$(get_libdir)"
+ -DGDCM_INSTALL_PYTHONMODULE_DIR="lib/${EPYTHON}/site-packages"
+ -DGDCM_USE_SYSTEM_CHARLS=ON
+ -DGDCM_USE_SYSTEM_EXPAT=ON
+ -DGDCM_USE_SYSTEM_JSON=ON
+ -DGDCM_USE_SYSTEM_LIBXML2=ON
+ -DGDCM_USE_SYSTEM_LJPEG=OFF
+ -DGDCM_USE_SYSTEM_OPENJPEG=ON
+ -DGDCM_USE_SYSTEM_OPENSSL=ON
+ -DGDCM_USE_SYSTEM_PAPYRUS3=OFF
+ -DGDCM_USE_SYSTEM_POPPLER=ON
+ -DGDCM_USE_SYSTEM_SOCKETXX=OFF
+ -DGDCM_USE_SYSTEM_UUID=ON
+ -DGDCM_USE_SYSTEM_ZLIB=ON
+ -DGDCM_USE_VTK=$(usex vtk)
+ -DGDCM_WRAP_CSHARP=OFF
+ -DGDCM_WRAP_JAVA=OFF
+ -DGDCM_WRAP_PERL=OFF
+ -DGDCM_WRAP_PHP=OFF
+ -DGDCM_WRAP_PYTHON=$(usex python)
+ -DSOCKETXX_NAMESPACE=GDCMSOCKETXX
+ )
+ cmake_src_configure
+}
