commit:     5cdf64649280508520fc9b96b6926e0ce2c0d283
Author:     Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
AuthorDate: Sat Apr 12 12:29:38 2014 +0000
Commit:     Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz>
CommitDate: Sat Apr 12 12:29:38 2014 +0000
URL:        
http://git.overlays.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=5cdf6464

Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci


 dev-python/ffnet/ChangeLog                         |    6 +-
 dev-python/ffnet/Manifest                          |    2 +-
 .../{ffnet-0.6.2.ebuild => ffnet-0.7.1.ebuild}     |   23 +-
 dev-python/ffnet/metadata.xml                      |   10 +-
 sci-chemistry/gromacs/ChangeLog                    |    8 +
 sci-chemistry/gromacs/Manifest                     |    4 +-
 ...cs-5.0_beta1.ebuild => gromacs-5.0.9999.ebuild} |   50 +-
 ...{gromacs-9999.ebuild => gromacs-5.0_rc1.ebuild} |   43 +-
 sci-chemistry/gromacs/gromacs-9999.ebuild          |   39 +-
 sci-chemistry/gromacs/metadata.xml                 |   11 +-
 sci-libs/dcmtk/ChangeLog                           |   14 +-
 sci-libs/dcmtk/Manifest                            |    4 +-
 sci-libs/dcmtk/dcmtk-3.5.4-r3.ebuild               |   71 -
 sci-libs/dcmtk/dcmtk-3.5.5_pre20101008.ebuild      |   79 -
 sci-libs/dcmtk/dcmtk-3.6.0.ebuild                  |   72 +
 sci-libs/dcmtk/files/02_dcmtk_3.6.0-1.patch        |   89 +
 sci-libs/dcmtk/files/07_doxygen.patch              | 1804 ++++++++++++++++++++
 sci-libs/dcmtk/files/bug674361.patch               | 1015 +++++++++++
 sci-libs/dcmtk/files/dcmtk-asneeded.patch          |   16 +
 sci-libs/dcmtk/files/dcmtk_version_number.patch    |  131 ++
 sci-libs/dcmtk/files/doubledes.patch               |   31 +
 sci-libs/dcmtk/files/fixnull.patch                 |   36 +
 sci-libs/dcmtk/files/noleak.patch                  |   36 +
 sci-libs/dcmtk/files/nothrow.patch                 |   76 +
 sci-libs/dcmtk/files/prefs.patch                   |   26 +
 .../files/regression_stacksequenceisodd.patch      |   98 ++
 .../dcmtk/files/use_correct_number_of_TS.patch     |   19 +
 sci-libs/dcmtk/metadata.xml                        |   30 +-
 sci-libs/itk/ChangeLog                             |   11 +
 sci-libs/itk/Manifest                              |    2 +
 ...p-TransformFileReader-TransformFileWriter.patch |   50 +
 ...itkQuasiNewtonOptimizerv4-wrapping-warnin.patch |   28 +
 ...itkGradientDescentOptimizerv4-wrapping-wa.patch |   73 +
 ...OptimizerParameterScalesEstimatorTemplate.patch |   30 +
 .../0005-make-gdcm-helper-library-static.patch     |   11 +
 sci-libs/itk/files/nrrdio-linking.patch            |   15 +
 .../itk/{itk-4.4.2-r1.ebuild => itk-4.5.1.ebuild}  |   76 +-
 sci-mathematics/pulp/ChangeLog                     |    6 +-
 sci-mathematics/pulp/Manifest                      |    2 +-
 .../pulp/{pulp-1.5.3.ebuild => pulp-1.5.6.ebuild}  |   16 +-
 sci-visualization/visit/visit-2.7.2.ebuild         |    6 +
 41 files changed, 3872 insertions(+), 297 deletions(-)

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