commit: a6298fa095118e09df854067473dcbd239950034
Author: Arthur Zamarin <arthurzam <AT> gentoo <DOT> org>
AuthorDate: Sat Apr 12 16:03:32 2025 +0000
Commit: Arthur Zamarin <arthurzam <AT> gentoo <DOT> org>
CommitDate: Sat Apr 12 16:03:32 2025 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=a6298fa0
sci-chemistry/autodock: drop 4.2.6, EAPI=7--
Signed-off-by: Arthur Zamarin <arthurzam <AT> gentoo.org>
sci-chemistry/autodock/autodock-4.2.6.ebuild | 106 ---------------------------
1 file changed, 106 deletions(-)
diff --git a/sci-chemistry/autodock/autodock-4.2.6.ebuild
b/sci-chemistry/autodock/autodock-4.2.6.ebuild
deleted file mode 100644
index ba012304d26e..000000000000
--- a/sci-chemistry/autodock/autodock-4.2.6.ebuild
+++ /dev/null
@@ -1,106 +0,0 @@
-# Copyright 1999-2023 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-inherit autotools readme.gentoo-r1
-
-MY_PN="autodocksuite"
-MY_P="${MY_PN}-${PV}"
-
-DESCRIPTION="A suite of automated docking tools"
-HOMEPAGE="http://autodock.scripps.edu/";
-SRC_URI="http://autodock.scripps.edu/downloads/autodock-registration/tars/dist$(ver_rs
1- '')/${MY_P}-src.tar.gz"
-S="${WORKDIR}/src"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="examples openmp"
-# Tests require python2
-RESTRICT="test"
-
-# False positives caused by nested configure scripts
-QA_CONFIGURE_OPTIONS=".*"
-
-DISABLE_AUTOFORMATTING="yes"
-DOC_CONTENTS="
-The AutoDock development team requests all users to fill out the
-registration form at:
-
-http://autodock.scripps.edu/downloads/autodock-registration
-
-The number of unique users of AutoDock is used by Prof. Arthur J.
-Olson and the Scripps Research Institude to support grant
-applications.
-"
-
-PATCHES=(
- "${FILESDIR}"/${P}-buildsystem.patch
-)
-
-src_prepare() {
- default
-
- local i
-
- sed \
- -e "s/\tcsh/\tsh/" \
- -i auto{dock,grid}/Makefile.am || die
- for i in autodock autogrid; do
- pushd $i &>/dev/null
- eautoreconf
- popd &>/dev/null
- done
-}
-
-src_configure() {
- local i
- for i in autodock autogrid; do
- pushd $i &>/dev/null
- econf $(use_enable openmp)
- popd &>/dev/null
- done
-}
-
-src_compile() {
- emake -C autodock
- emake -C autogrid
-}
-
-src_test() {
- elog "Testing autodock"
- cd "${S}/autodock/Tests" || die
- cp ../*.dat . || die
- ${EPYTHON} test_autodock4.py || die "AutoDock tests failed."
- einfo "Testing autogrid"
- cd "${S}/autogrid/Tests" || die
- ${EPYTHON} test_autogrid4.py || die "AutoGrid tests failed."
-}
-
-src_install() {
- if use openmp; then
- newbin autodock/autodock4.omp ${PN}4
- dobin autogrid/autogrid4
- else
- dobin autodock/autodock4 autogrid/autogrid4
- fi
-
- insinto /usr/share/${PN}
- doins -r \
- autodock/{AD4_parameters.dat,AD4_PARM99.dat} \
- $(usex examples "autodock/EXAMPLES" "")
-
- DOCS=(
- RELEASENOTES
- autodock/{AUTHORS,README}
- autodock/USERGUIDES/AutoDock4.{0,1,2}_UserGuide.doc
- autodock/USERGUIDES/AutoDock4.2_UserGuide.pdf
- )
- einstalldocs
- readme.gentoo_create_doc
-}
-
-pkg_postinst() {
- readme.gentoo_print_elog
-}
