commit: 40f4fe42cc7de00be0e0e52b0e49d085aa12454c Author: Andres Becerra <andres.becerra <AT> gmail <DOT> com> AuthorDate: Fri Oct 3 12:55:34 2025 +0000 Commit: Andrés Becerra <andres.becerra <AT> gmail <DOT> com> CommitDate: Fri Oct 3 12:55:34 2025 +0000 URL: https://gitweb.gentoo.org/repo/proj/guru.git/commit/?id=40f4fe42
sci-biology/cytoscape-bin: add 3.10.4 Signed-off-by: Andres Becerra <andres.becerra <AT> gmail.com> sci-biology/cytoscape-bin/Manifest | 1 + .../cytoscape-bin/cytoscape-bin-3.10.4.ebuild | 40 ++++++++++++++++++++++ 2 files changed, 41 insertions(+) diff --git a/sci-biology/cytoscape-bin/Manifest b/sci-biology/cytoscape-bin/Manifest index 8e0a5f055c..5348a2468b 100644 --- a/sci-biology/cytoscape-bin/Manifest +++ b/sci-biology/cytoscape-bin/Manifest @@ -1 +1,2 @@ DIST cytoscape-unix-3.10.3.tar.gz 359982151 BLAKE2B 431a5abbfb736d843cfacc18ccf553f86bb068f18112ec6aa56d85db8910b56885e40f200722bbfcf294199a24d62f79243ea1d6af265684cc69b32505bae55b SHA512 44d26d4910d44c9643b3480d3ec6e0e92606337aab83c56fccc2e40798970a8b3b9861b891c4f9103e1dd37d540ce8cb2f52438d2eeeef3d8b9e63f3620b5da6 +DIST cytoscape-unix-3.10.4.tar.gz 357480347 BLAKE2B 85f25e2a3950bd9c60721b354c0fe6b00aefc9239ec6073c1ae797677f584e9f36501a2b822a2c48e788e649955fa79384984d1cf9c79eb7189cd5124c23cd65 SHA512 36948acca38a465dedc0b2fc6063f1c1a9bdadc6d378970c21fd910ddcfc436ecc246ba685cb958b5d9f7b4505a96533da82783d91500d6fe788cbd01c958a4e diff --git a/sci-biology/cytoscape-bin/cytoscape-bin-3.10.4.ebuild b/sci-biology/cytoscape-bin/cytoscape-bin-3.10.4.ebuild new file mode 100644 index 0000000000..e259d4684e --- /dev/null +++ b/sci-biology/cytoscape-bin/cytoscape-bin-3.10.4.ebuild @@ -0,0 +1,40 @@ +# Copyright 2024 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI="8" + +inherit desktop java-pkg-2 + +DESCRIPTION="A visualization platform for molecular interaction networks" +HOMEPAGE="https://www.cytoscape.org/"; +SRC_URI="https://github.com/cytoscape/cytoscape/releases/download/${PV}/cytoscape-unix-${PV}.tar.gz"; + +S="${WORKDIR}" + +LICENSE="LGPL-2.1" +SLOT="0" +KEYWORDS="~amd64 ~x86" +RDEPEND="virtual/jdk:17" + +src_install() { + MY_PN="cytoscape" + MYW="${WORKDIR}/${MY_PN}-unix-${PV}" + + insinto "/opt/${MY_PN}" + doins -r ${MYW}/apps + doins -r ${MYW}/framework + doins -r ${MYW}/sampleData + + cd ${MYW} + sh gen_vmoptions.sh + doins Cytoscape.vmoptions + exeinto "/opt/${MY_PN}" + doexe "${MYW}/${MY_PN}.sh" + dosym "${EPREFIX}/opt/${MY_PN}/${MY_PN}.sh" "${EPREFIX}/opt/bin/${MY_PN}" + + exeinto "/opt/${MY_PN}/framework/bin" + doexe framework/bin/karaf + + newicon framework/cytoscape_logo_512.png cytoscape_logo.png + make_desktop_entry ${MY_PN} CytoScape cytoscape_logo Science +}
