commit: f1c7463d1a1329e3e5d41c83bd329eac5dc5e552 Author: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org> AuthorDate: Mon Sep 29 16:06:09 2025 +0000 Commit: Andreas Sturmlechner <asturm <AT> gentoo <DOT> org> CommitDate: Tue Sep 30 19:37:51 2025 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=f1c7463d
sci-mathematics/diagrtb: treeclean Closes: https://bugs.gentoo.org/952062 (pkgremoved) Closes: https://bugs.gentoo.org/957253 (pkgremoved) Signed-off-by: Andreas Sturmlechner <asturm <AT> gentoo.org> profiles/package.mask | 5 ---- sci-mathematics/diagrtb/Manifest | 1 - sci-mathematics/diagrtb/diagrtb-2.64.ebuild | 34 ---------------------------- sci-mathematics/diagrtb/files/CMakeLists.txt | 12 ---------- sci-mathematics/diagrtb/metadata.xml | 27 ---------------------- 5 files changed, 79 deletions(-) diff --git a/profiles/package.mask b/profiles/package.mask index 162877a9f1a9..9ed1c5e92bc4 100644 --- a/profiles/package.mask +++ b/profiles/package.mask @@ -202,11 +202,6 @@ sci-libs/silo net-analyzer/nipper net-libs/libnipper -# Andreas Sturmlechner <[email protected]> (2025-09-01) -# EAPI-7 cmake.eclass, no revdeps, no one else is packaging this. -# Bugs #952062, #957253. Removal on 2025-10-01. -sci-mathematics/diagrtb - # Eli Schwartz <[email protected]> (2025-09-01) # Effectively unmaintained in Gentoo. Upstream dead for 8 years. Stuck # on py3.11, but no testsuite and still has py2-specific source code so diff --git a/sci-mathematics/diagrtb/Manifest b/sci-mathematics/diagrtb/Manifest deleted file mode 100644 index 36cb5f91b558..000000000000 --- a/sci-mathematics/diagrtb/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST diagrtb-2.64.tar.gz 2429842 BLAKE2B 69c66e12ffda708a9d2b73d576a44600c854e4848d60a1f195a39dcd3be1dcb368b33e233d296f939e78a8b77b6baf1d8f77161b999c55b7a159b11a099b5c88 SHA512 90b1cb40d6d31cf40e27fcd50cdf864e7de036a415c56c1406f6af58339788b6a2f000abe117ad4200d3086f589e4ee916e3a7e2dd52522581de2244ad444a2c diff --git a/sci-mathematics/diagrtb/diagrtb-2.64.ebuild b/sci-mathematics/diagrtb/diagrtb-2.64.ebuild deleted file mode 100644 index 59b01102533f..000000000000 --- a/sci-mathematics/diagrtb/diagrtb-2.64.ebuild +++ /dev/null @@ -1,34 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -inherit cmake fortran-2 - -DESCRIPTION="Calculation of some eigenvectors of a large real, symmetrical, matrix" -HOMEPAGE="http://ecole.modelisation.free.fr/modes.html"; -SRC_URI="http://ecole.modelisation.free.fr/rtb2011.tar.gz -> ${P}.tar.gz" - -LICENSE="all-rights-reserved" -SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="examples" -RESTRICT="mirror bindist" - -S="${WORKDIR}"/Source_RTB2011 - -DOCS=( diagrtb.README ) - -src_prepare() { - cp "${FILESDIR}"/CMakeLists.txt . || die - - cmake_src_prepare -} - -src_configure() { - local mycmakeargs=( - -DEXAMPLES=$(usex examples) - ) - - cmake_src_configure -} diff --git a/sci-mathematics/diagrtb/files/CMakeLists.txt b/sci-mathematics/diagrtb/files/CMakeLists.txt deleted file mode 100644 index ef022328bce9..000000000000 --- a/sci-mathematics/diagrtb/files/CMakeLists.txt +++ /dev/null @@ -1,12 +0,0 @@ -cmake_minimum_required (VERSION 2.6) -project (DIAGRTB Fortran) - -option (EXAMPLES "Instal additional example files" OFF) - -add_executable(diagrtb diagrtb.f) - -install (TARGETS diagrtb DESTINATION bin) - -if ( EXAMPLES ) - install (DIRECTORY ../Try_RTB2011 DESTINATION share/diagrtb/examples) -endif (EXAMPLES) diff --git a/sci-mathematics/diagrtb/metadata.xml b/sci-mathematics/diagrtb/metadata.xml deleted file mode 100644 index 27c551e3d3e2..000000000000 --- a/sci-mathematics/diagrtb/metadata.xml +++ /dev/null @@ -1,27 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "https://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <maintainer type="project"> - <email>[email protected]</email> - <name>Gentoo Chemistry Project</name> - </maintainer> - <longdescription> -A fortran program for the calculation of some eigenvectors of a large real, -symmetrical, matrix. -If the matrix was obtained, for instance, with the PDBMAT program, these -eigenvectors correspond to the low-frequency normal modes (i.e., mostly -those with a collective character) of the system. Note that in the case of -proteins, low-frequency normal modes thus obtained are found to be very close -to those obtained with standard, much more realistic (e.g., all atoms with -empirical force fields), models. - -The method used rests upon the RTB approximation (standing for -Rotations-Translations-of-Blocks). Within the frame of this approximation, -blocks of n (n=1,2,...) consecutive monomers (amino-acid residues) are -assumed to behave like rigid bodies. - -Requirements: a matrix in the "i j non-zero-ij-matrix-element" format. -A file with the coordinates of the system, in the PDB or "x y z mass -block-number" format. - </longdescription> -</pkgmetadata>
