dilfridge 15/04/03 15:31:25 Modified: ChangeLog Added: vcftools-0.1.12b.ebuild Log: Version bump, fixing bug 545304 (Portage version: 2.2.18/cvs/Linux x86_64, signed Manifest commit with key 0B08240A96F66571)
Revision Changes Path 1.7 sci-biology/vcftools/ChangeLog file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/vcftools/ChangeLog?rev=1.7&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/vcftools/ChangeLog?rev=1.7&content-type=text/plain diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/vcftools/ChangeLog?r1=1.6&r2=1.7 Index: ChangeLog =================================================================== RCS file: /var/cvsroot/gentoo-x86/sci-biology/vcftools/ChangeLog,v retrieving revision 1.6 retrieving revision 1.7 diff -u -r1.6 -r1.7 --- ChangeLog 12 Mar 2013 12:13:12 -0000 1.6 +++ ChangeLog 3 Apr 2015 15:31:25 -0000 1.7 @@ -1,6 +1,12 @@ # ChangeLog for sci-biology/vcftools -# Copyright 1999-2013 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-biology/vcftools/ChangeLog,v 1.6 2013/03/12 12:13:12 jlec Exp $ +# Copyright 1999-2015 Gentoo Foundation; Distributed under the GPL v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/vcftools/ChangeLog,v 1.7 2015/04/03 15:31:25 dilfridge Exp $ + +*vcftools-0.1.12b (03 Apr 2015) + + 03 Apr 2015; Andreas K. Huettel <dilfri...@gentoo.org> + +vcftools-0.1.12b.ebuild, +files/vcftools-0.1.12b-buildsystem.patch: + Version bump, fixing bug 545304 12 Mar 2013; Justin Lecher <j...@gentoo.org> metadata.xml: Drop Andrey as maintainer so that bugs get assigned to sci-biology directly 1.1 sci-biology/vcftools/vcftools-0.1.12b.ebuild file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/vcftools/vcftools-0.1.12b.ebuild?rev=1.1&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-biology/vcftools/vcftools-0.1.12b.ebuild?rev=1.1&content-type=text/plain Index: vcftools-0.1.12b.ebuild =================================================================== # Copyright 1999-2015 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-biology/vcftools/vcftools-0.1.12b.ebuild,v 1.1 2015/04/03 15:31:25 dilfridge Exp $ EAPI=5 PERL_EXPORT_PHASE_FUNCTIONS=no inherit perl-module eutils toolchain-funcs MY_P="${PN}_${PV}" DESCRIPTION="Tools for working with VCF (Variant Call Format) files" HOMEPAGE="http://vcftools.sourceforge.net/"; SRC_URI="mirror://sourceforge/${PN}/${MY_P}.tar.gz" LICENSE="LGPL-3" SLOT="0" KEYWORDS="~x86 ~amd64" IUSE="lapack" RDEPEND="lapack? ( virtual/lapack )" DEPEND="${RDEPEND} virtual/pkgconfig" S="${WORKDIR}/${MY_P}" src_prepare() { epatch "${FILESDIR}"/${P}-buildsystem.patch tc-export CXX PKG_CONFIG } src_compile() { local myconf use lapack && myconf="VCFTOOLS_PCA=1" emake -C cpp ${myconf} } src_install(){ perl_set_version dobin cpp/${PN} insinto ${VENDOR_LIB} doins perl/*.pm dobin perl/{fill,vcf}-* dodoc README.txt }
