commit: 0561406b09f038d22217d0d455a569d4eb8192e2 Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Mon Apr 11 13:04:48 2016 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Mon Apr 11 13:04:48 2016 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=0561406b
sci-biology/pysamstats: new package Package-Manager: portage-2.2.28 sci-biology/pysamstats/metadata.xml | 12 ++++++++++++ sci-biology/pysamstats/pysamstats-0.24.2.ebuild | 23 +++++++++++++++++++++++ 2 files changed, 35 insertions(+) diff --git a/sci-biology/pysamstats/metadata.xml b/sci-biology/pysamstats/metadata.xml new file mode 100644 index 0000000..f68a1b6 --- /dev/null +++ b/sci-biology/pysamstats/metadata.xml @@ -0,0 +1,12 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <maintainer type="person"> + <email>mmokr...@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biol...@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata> diff --git a/sci-biology/pysamstats/pysamstats-0.24.2.ebuild b/sci-biology/pysamstats/pysamstats-0.24.2.ebuild new file mode 100644 index 0000000..39c5fe4 --- /dev/null +++ b/sci-biology/pysamstats/pysamstats-0.24.2.ebuild @@ -0,0 +1,23 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=6 + +PYTHON_COMPAT=( python2_7 python3_4 ) + +inherit distutils-r1 + +DESCRIPTION="Calculate statistics against genome positions from a SAM, BAM or CRAM file" +HOMEPAGE="https://github.com/alimanfoo/pysamstats + https://pypi.python.org/pypi/pysamstats"; +SRC_URI="mirror://pypi/p/${PN}/${P}.tar.gz" + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND="dev-python/cython + >=sci-biology/pysam-0.8.4" +RDEPEND="${DEPEND}"
