commit: 4f3cb1a1598818ffe5e92cec47aea451216cf22b Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Fri Apr 14 17:16:41 2017 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Fri Apr 14 17:16:41 2017 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=4f3cb1a1
sci-biology/bam-readcount: new package Is needed by VarScan. Package-Manager: Portage-2.3.5, Repoman-2.3.2 sci-biology/bam-readcount/bam-readcount-0.8.0.ebuild | 18 ++++++++++++++++++ sci-biology/bam-readcount/bam-readcount-9999.ebuild | 18 ++++++++++++++++++ sci-biology/bam-readcount/metadata.xml | 12 ++++++++++++ 3 files changed, 48 insertions(+) diff --git a/sci-biology/bam-readcount/bam-readcount-0.8.0.ebuild b/sci-biology/bam-readcount/bam-readcount-0.8.0.ebuild new file mode 100644 index 000000000..dbc344fd9 --- /dev/null +++ b/sci-biology/bam-readcount/bam-readcount-0.8.0.ebuild @@ -0,0 +1,18 @@ +# Copyright 1999-2017 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=5 + +inherit cmake-utils + +DESCRIPTION="Count DNA sequence reads in BAM files and other statistics calculations" +HOMEPAGE="https://github.com/genome/bam-readcount"; +SRC_URI="https://github.com/genome/bam-readcount/archive/v0.8.0.tar.gz -> ${P}.tar.gz" + +LICENSE="MIT" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND}" diff --git a/sci-biology/bam-readcount/bam-readcount-9999.ebuild b/sci-biology/bam-readcount/bam-readcount-9999.ebuild new file mode 100644 index 000000000..a9b8c4f0b --- /dev/null +++ b/sci-biology/bam-readcount/bam-readcount-9999.ebuild @@ -0,0 +1,18 @@ +# Copyright 1999-2017 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=5 + +inherit git-r3 cmake-utils + +DESCRIPTION="Count DNA sequence reads in BAM files and other statistics calculations" +HOMEPAGE="https://github.com/genome/bam-readcount"; +EGIT_REPO_URI="https://github.com/genome/bam-readcount.git"; + +LICENSE="MIT" +SLOT="0" +KEYWORDS="" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND}" diff --git a/sci-biology/bam-readcount/metadata.xml b/sci-biology/bam-readcount/metadata.xml new file mode 100644 index 000000000..f68a1b6fa --- /dev/null +++ b/sci-biology/bam-readcount/metadata.xml @@ -0,0 +1,12 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <maintainer type="person"> + <email>mmokr...@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biol...@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata>
