commit: c66f17dceb2a1745d80882ed478f2331735d4a54 Author: Justin Lecher <jlec <AT> gentoo <DOT> org> AuthorDate: Fri May 19 09:18:08 2017 +0000 Commit: Justin Lecher <jlec <AT> gentoo <DOT> org> CommitDate: Fri May 19 09:52:25 2017 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=c66f17dc
sci-chemistry/openbabel: Version Bump which fixes build problems with earlier versions Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=618402 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=618414 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=618542 Package-Manager: Portage-2.3.5, Repoman-2.3.2 Signed-off-by: Justin Lecher <jlec <AT> gentoo.org> sci-chemistry/openbabel/Manifest | 1 + .../files/openbabel-2.3.2-test_lib_path.patch | 4 +- sci-chemistry/openbabel/openbabel-2.4.1.ebuild | 92 ++++++++++++++++++++++ 3 files changed, 95 insertions(+), 2 deletions(-) diff --git a/sci-chemistry/openbabel/Manifest b/sci-chemistry/openbabel/Manifest index 082e5b02984..3d09a5c54b9 100644 --- a/sci-chemistry/openbabel/Manifest +++ b/sci-chemistry/openbabel/Manifest @@ -1 +1,2 @@ DIST openbabel-2.3.2.tar.gz 20509105 SHA256 4eaca26679aa6cc85ebf96af19191472ac63ca442c36b0427b369c3a25705188 SHA512 d0e1f8b758ffdd65ec6c31d988bffe3279355e286ce69fad12c5905b3b832e2b73ee95b1061b1576aba1ee9fe4da5e31ec30350c473be17493c657dc80caf919 WHIRLPOOL 74eff18b73d24c8f702e5573a58ba6afba8402e9ce8782de95dc0568575a7d2d632dbc8e8a98b3cd25efdfa7379494f7dcd449342c81ddf73f42a387bce77aaa +DIST openbabel-2.4.1.tar.gz 11618304 SHA256 204136582cdfe51d792000b20202de8950218d617fd9c6e18cee36706a376dfc SHA512 427e678f0a911bd27b9a8a05e60b6e09f113be4e5dd180daaf80c28d06368e52b57501261755ab3817a8d31f2754db24471fd0ceee706d029386d6f70800e9c6 WHIRLPOOL 88e333b47118449e1edba2b164af77ac7fac9c60e2965b5d6657ba8cf981845f49f6bac9427515ebbdf62668fddf38ae2422c4e107b98df46922c5bba860b216 diff --git a/sci-chemistry/openbabel/files/openbabel-2.3.2-test_lib_path.patch b/sci-chemistry/openbabel/files/openbabel-2.3.2-test_lib_path.patch index 1354f52685c..66a796d17b7 100644 --- a/sci-chemistry/openbabel/files/openbabel-2.3.2-test_lib_path.patch +++ b/sci-chemistry/openbabel/files/openbabel-2.3.2-test_lib_path.patch @@ -1,6 +1,6 @@ diff -ru old/openbabel-2.3.0/test/CMakeLists.txt new/openbabel-2.3.0/test/CMakeLists.txt ---- old/openbabel-2.3.0/test/CMakeLists.txt 2010-10-26 17:39:01.000000000 +0300 -+++ new/openbabel-2.3.0/test/CMakeLists.txt 2010-11-14 18:13:32.000000000 +0200 +--- a/test/CMakeLists.txt 2010-10-26 17:39:01.000000000 +0300 ++++ b/test/CMakeLists.txt 2010-11-14 18:13:32.000000000 +0200 @@ -2,7 +2,7 @@ add_definitions(-DTESTDATADIR="\\"${CMAKE_SOURCE_DIR}/test/files/\\"") diff --git a/sci-chemistry/openbabel/openbabel-2.4.1.ebuild b/sci-chemistry/openbabel/openbabel-2.4.1.ebuild new file mode 100644 index 00000000000..7674873aea9 --- /dev/null +++ b/sci-chemistry/openbabel/openbabel-2.4.1.ebuild @@ -0,0 +1,92 @@ +# Copyright 1999-2017 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +WX_GTK_VER="3.0" + +inherit cmake-utils eutils wxwidgets + +DESCRIPTION="Interconverts file formats used in molecular modeling" +HOMEPAGE="http://openbabel.sourceforge.net/"; +SRC_URI="mirror://sourceforge/openbabel/${P}.tar.gz" + +# See src/CMakeLists.txt for LIBRARY_VERSION +SLOT="0/5.0.0" +LICENSE="GPL-2" +KEYWORDS="~amd64 ~arm ~ppc ~x86 ~amd64-linux ~x86-linux ~ppc-macos" +IUSE="doc openmp test wxwidgets" + +RDEPEND=" + dev-cpp/eigen:3 + dev-libs/libxml2:2 + sci-libs/inchi + sys-libs/zlib + wxwidgets? ( x11-libs/wxGTK:${WX_GTK_VER}[X] )" +DEPEND="${RDEPEND} + >=dev-util/cmake-2.4.8 + doc? ( app-doc/doxygen )" + +DOCS=( AUTHORS NEWS.md README.md THANKS doc/dioxin.{inc,mol2} doc/README.{dioxin.pov,povray} ) + +PATCHES=( + "${FILESDIR}"/${PN}-2.3.2-gcc-6_and_7-backport.patch + ) + +pkg_setup() { + if use openmp; then + if [[ $(tc-getCC) == *gcc ]] && ! tc-has-openmp; then + ewarn "OpenMP is not available in your current selected gcc" + die "need openmp capable gcc" + fi + FORTRAN_NEED_OPENMP=1 + fi +} + +src_prepare() { + sed \ + -e '/__GNUC__/s:== 4:>= 4:g' \ + -i include/openbabel/shared_ptr.h || die + cmake-utils_src_prepare +} + +src_configure() { + use wxwidgets && need-wxwidgets unicode + local mycmakeargs=( + -DOPENBABEL_USE_SYSTEM_INCHI=ON + -DOPENMP=$(usex openmp) + -DBUILD_GUI=$(usex wxwidgets) + ) + + cmake-utils_src_configure +} + +src_install() { + docinto html + dodoc doc/{*.html,*.png} + if use doc ; then + docinto html/API + dodoc doc/API/html/* + fi + + cmake-utils_src_install +} + +src_test() { + local mycmakeargs=( + -DOPENBABEL_USE_SYSTEM_INCHI=ON + -DPYTHON_EXECUTABLE=false + -DOPENMP=$(usex openmp) + -DBUILD_GUI=$(usex wxwidgets) + -DTESTS=$(usex test) + ) + + cmake-utils_src_configure + cmake-utils_src_compile + cmake-utils_src_test -E py +} + +pkg_postinst() { + optfeature "perl support" sci-chemistry/openbabel-perl + optfeature "python support" sci-chemistry/openbabel-python +}
