commit: f6c7d5c837dda8298c255130f35c513a19934f5a Author: Martin Mokrejš <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> AuthorDate: Fri Jun 30 16:51:37 2017 +0000 Commit: Martin Mokrejs <mmokrejs <AT> fold <DOT> natur <DOT> cuni <DOT> cz> CommitDate: Fri Jul 28 20:05:08 2017 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=f6c7d5c8
sci-biology/KING: new package Package-Manager: Portage-2.3.5, Repoman-2.3.2 sci-biology/KING/KING-20161017.ebuild | 33 +++++++++++++++++++++++++++++++++ sci-biology/KING/metadata.xml | 12 ++++++++++++ 2 files changed, 45 insertions(+) diff --git a/sci-biology/KING/KING-20161017.ebuild b/sci-biology/KING/KING-20161017.ebuild new file mode 100644 index 000000000..95ba91702 --- /dev/null +++ b/sci-biology/KING/KING-20161017.ebuild @@ -0,0 +1,33 @@ +# Copyright 1999-2017 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 + +EAPI=6 + +inherit eutils toolchain-funcs + +DESCRIPTION="Check family relationship and infer population structure" +HOMEPAGE="http://people.virginia.edu/~wc9c/KING + http://people.virginia.edu/~wc9c/publications/pdf/BI26_2867.pdf"; +SRC_URI="http://people.virginia.edu/~wc9c/KING/KINGcode.tar.gz -> ${P}.tar.gz + http://people.virginia.edu/~wc9c/KING/manual.html -> ${PN}_relationship_inference.html + http://people.virginia.edu/~wc9c/KING/kingpopulation.html -> ${PN}.kingpopulation.html" + +LICENSE="all-rights-reserved" # Our robust relationship inference algorithm is implemented in a freely available software package +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND}" + +S="${WORKDIR}" + +src_compile(){ + $(tc-getCXX) ${CXXFLAGS} -lm -lz -fopenmp -o king *.cpp +} + +src_install(){ + newbin {king,KING} + insinto /usr/share/doc/"${PN}" + dodoc "${DISTDIR}"/"${PN}"_relationship_inference.html "${DISTDIR}"/"${PN}".kingpopulation.html +} diff --git a/sci-biology/KING/metadata.xml b/sci-biology/KING/metadata.xml new file mode 100644 index 000000000..f68a1b6fa --- /dev/null +++ b/sci-biology/KING/metadata.xml @@ -0,0 +1,12 @@ +<?xml version="1.0" encoding="UTF-8"?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> +<pkgmetadata> + <maintainer type="person"> + <email>mmokr...@fold.natur.cuni.cz</email> + <name>Martin Mokrejs</name> + </maintainer> + <maintainer type="project"> + <email>sci-biol...@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +</pkgmetadata>
