commit:     e035eabc7b791b9854e53cf596b65e8330ef6e83
Author:     David Seifert <soap <AT> gentoo <DOT> org>
AuthorDate: Sat Jun 30 14:58:58 2018 +0000
Commit:     David Seifert <soap <AT> gentoo <DOT> org>
CommitDate: Sat Jun 30 14:59:32 2018 +0000
URL:        https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=e035eabc

sci-biology/cufflinks: Fix implicit conversion in make_pair call

Closes: https://bugs.gentoo.org/650416
Package-Manager: Portage-2.3.41, Repoman-2.3.9

 sci-biology/cufflinks/cufflinks-2.2.1-r2.ebuild               |  3 ++-
 .../cufflinks/files/cufflinks-2.2.1-gcc5-make_shared.patch    | 11 +++++++++++
 2 files changed, 13 insertions(+), 1 deletion(-)

diff --git a/sci-biology/cufflinks/cufflinks-2.2.1-r2.ebuild 
b/sci-biology/cufflinks/cufflinks-2.2.1-r2.ebuild
index 745baffad99..3892e03e23b 100644
--- a/sci-biology/cufflinks/cufflinks-2.2.1-r2.ebuild
+++ b/sci-biology/cufflinks/cufflinks-2.2.1-r2.ebuild
@@ -1,4 +1,4 @@
-# Copyright 1999-2017 Gentoo Foundation
+# Copyright 1999-2018 Gentoo Foundation
 # Distributed under the terms of the GNU General Public License v2
 
 EAPI=6
@@ -33,6 +33,7 @@ PATCHES=(
        "${FILESDIR}"/${P}-boost-1.65-tr1-removal.patch
        "${FILESDIR}"/${P}-gcc7.patch
        "${FILESDIR}"/${P}-format-security.patch
+       "${FILESDIR}"/${P}-gcc5-make_shared.patch
 )
 
 src_prepare() {

diff --git a/sci-biology/cufflinks/files/cufflinks-2.2.1-gcc5-make_shared.patch 
b/sci-biology/cufflinks/files/cufflinks-2.2.1-gcc5-make_shared.patch
new file mode 100644
index 00000000000..67a28df1024
--- /dev/null
+++ b/sci-biology/cufflinks/files/cufflinks-2.2.1-gcc5-make_shared.patch
@@ -0,0 +1,11 @@
+--- a/src/differential.cpp
++++ b/src/differential.cpp
+@@ -575,7 +575,7 @@
+     boost::mutex::scoped_lock lock(meta_data_lock);
+ #endif
+     pair<SampleDiffMetaDataTable::iterator, bool> p;
+-    p = meta_data_table.insert(make_pair(description, new 
SampleDifferenceMetaData()));
++    p = meta_data_table.insert(make_pair(description, 
boost::make_shared<SampleDifferenceMetaData>()));
+     return p.first->second;
+ }
+ 

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