commit: 89e43de4283587a68e29f49392474fbc59c23b73 Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net> AuthorDate: Tue Jan 19 13:04:18 2021 +0000 Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net> CommitDate: Tue Jan 19 13:04:18 2021 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=89e43de4
sci-biology/jannovar-bin: version bump 0.35, unmask remove non-bin version, maven is not supported by portage Package-Manager: Portage-3.0.13, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net> ...annovar-bin-0.17.ebuild => jannovar-bin-0.35.ebuild} | 17 +++++++---------- 1 file changed, 7 insertions(+), 10 deletions(-) diff --git a/sci-biology/jannovar-bin/jannovar-bin-0.17.ebuild b/sci-biology/jannovar-bin/jannovar-bin-0.35.ebuild similarity index 71% rename from sci-biology/jannovar-bin/jannovar-bin-0.17.ebuild rename to sci-biology/jannovar-bin/jannovar-bin-0.35.ebuild index 4544eaab8..1b3a90297 100644 --- a/sci-biology/jannovar-bin/jannovar-bin-0.17.ebuild +++ b/sci-biology/jannovar-bin/jannovar-bin-0.35.ebuild @@ -1,27 +1,25 @@ -# Copyright 1999-2016 Gentoo Foundation +# Copyright 1999-2021 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 -EAPI=5 +EAPI=7 inherit java-pkg-2 DESCRIPTION="Exome annotation tool (upstream jar binaries)" -HOMEPAGE="http://compbio.charite.de - https://github.com/charite/jannovar"; -SRC_URI="https://search.maven.org/remotecontent?filepath=de/charite/compbio/jannovar-cli/${PV}/jannovar-cli-${PV}.jar +HOMEPAGE="https://jannovar.readthedocs.io/en/master/"; +SRC_URI=" + https://search.maven.org/remotecontent?filepath=de/charite/compbio/jannovar-cli/${PV}/jannovar-cli-${PV}.jar https://search.maven.org/remotecontent?filepath=de/charite/compbio/jannovar-vardbs/${PV}/jannovar-vardbs-${PV}.jar https://search.maven.org/remotecontent?filepath=de/charite/compbio/jannovar-htsjdk/${PV}/jannovar-htsjdk-${PV}.jar - https://search.maven.org/remotecontent?filepath=de/charite/compbio/jannovar-inheritance-checker/${PV}/jannovar-inheritance-checker-${PV}.jar https://search.maven.org/remotecontent?filepath=de/charite/compbio/jannovar-core/${PV}/jannovar-core-${PV}.jar https://search.maven.org/remotecontent?filepath=de/charite/compbio/jannovar-hgvs/${PV}/jannovar-hgvs-${PV}.jar"; LICENSE="BSD-2" SLOT="0" KEYWORDS="~amd64 ~x86" -IUSE="" -DEPEND=">=virtual/jdk-1.6" -RDEPEND=">=virtual/jre-1.6" +DEPEND=">=virtual/jdk-1.7" +RDEPEND=">=virtual/jre-1.7" S="${WORKDIR}" @@ -30,7 +28,6 @@ src_install(){ java-pkg_dolauncher jannovar-cli-bin --jar jannovar-cli.jar java-pkg_newjar "${DISTDIR}"/jannovar-vardbs-"${PV}".jar jannovar-vardbs.jar java-pkg_newjar "${DISTDIR}"/jannovar-htsjdk-"${PV}".jar jannovar-htsjdk.jar - java-pkg_newjar "${DISTDIR}"/jannovar-inheritance-checker-"${PV}".jar jannovar-inheritance-checker.jar java-pkg_newjar "${DISTDIR}"/jannovar-core-${PV}.jar jannovar-core.jar java-pkg_newjar "${DISTDIR}"/jannovar-hgvs-${PV}.jar jannovar-hgvs.jar }
