commit: 141d595a554e77413db8b484a734ee2100d51cb5 Author: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net> AuthorDate: Mon Feb 1 04:54:12 2021 +0000 Commit: Andrew Ammerlaan <andrewammerlaan <AT> riseup <DOT> net> CommitDate: Mon Feb 1 04:54:12 2021 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=141d595a
sci-biology/stampy-bin: drop pack, py2 only documentation says it needs py2.6 or py2.7 Signed-off-by: Andrew Ammerlaan <andrewammerlaan <AT> riseup.net> sci-biology/stampy-bin/metadata.xml | 12 ------- sci-biology/stampy-bin/stampy-bin-1.0.28.ebuild | 43 ------------------------- 2 files changed, 55 deletions(-) diff --git a/sci-biology/stampy-bin/metadata.xml b/sci-biology/stampy-bin/metadata.xml deleted file mode 100644 index 138cb7705..000000000 --- a/sci-biology/stampy-bin/metadata.xml +++ /dev/null @@ -1,12 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd";> -<pkgmetadata> - <maintainer type="person"> - <email>mmokr...@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biol...@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> -</pkgmetadata> diff --git a/sci-biology/stampy-bin/stampy-bin-1.0.28.ebuild b/sci-biology/stampy-bin/stampy-bin-1.0.28.ebuild deleted file mode 100644 index 6d3034304..000000000 --- a/sci-biology/stampy-bin/stampy-bin-1.0.28.ebuild +++ /dev/null @@ -1,43 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 -PYTHON_COMPAT=( python2_7 ) - -inherit toolchain-funcs python-r1 python-utils-r1 - -DESCRIPTION="Map highly divergent short reads to a reference" -HOMEPAGE="http://www.well.ox.ac.uk/project-stampy"; -SRC_URI="stampy-${PV}.tar.gz" - -LICENSE="stampy-academic" -SLOT="0" -KEYWORDS="~amd64 ~x86" - -REQUIRED_USE="${PYTHON_REQUIRED_USE}" - -RESTRICT="fetch" - -DEPEND="${PYTHON_DEPS}" -RDEPEND="${DEPEND}" - -S="${WORKDIR}"/stampy-${PV} - -# FIXME: the makefile calls python but fails if that is under python-3.4, 2.7 works -# FIXME: respect CC and CXX - -src_prepare(){ - sed -e 's/-O2 -Wall/$(CFLAGS)/' -i makefile || die -} - -src_install(){ - dobin *.py - python_foreach_impl python_domodule maptools.so - python_moduleinto Stampy - python_foreach_impl python_domodule build/python2.7/Stampy/*.pyc # only *.pyc files available - python_moduleinto ext - python_foreach_impl python_domodule build/python2.7/ext/*.pyc # only *.pyc files available - python_moduleinto plugins - python_foreach_impl python_domodule build/python2.7/plugins/*.py* - dodoc README.txt -}
