jlec 14/10/20 18:05:38 Modified: ChangeLog Added: pymol-1.7.3.2.ebuild Log: sci-chemistry/pymol: Version Bump (Portage version: 2.2.14/cvs/Linux x86_64, RepoMan options: --force, signed Manifest commit with key B9D4F231BD1558AB!)
Revision Changes Path 1.120 sci-chemistry/pymol/ChangeLog file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/ChangeLog?rev=1.120&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/ChangeLog?rev=1.120&content-type=text/plain diff : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/ChangeLog?r1=1.119&r2=1.120 Index: ChangeLog =================================================================== RCS file: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v retrieving revision 1.119 retrieving revision 1.120 diff -u -r1.119 -r1.120 --- ChangeLog 17 Oct 2014 06:54:03 -0000 1.119 +++ ChangeLog 20 Oct 2014 18:05:38 -0000 1.120 @@ -1,6 +1,12 @@ # ChangeLog for sci-chemistry/pymol # Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v 1.119 2014/10/17 06:54:03 jlec Exp $ +# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/ChangeLog,v 1.120 2014/10/20 18:05:38 jlec Exp $ + +*pymol-1.7.3.2 (20 Oct 2014) + + 20 Oct 2014; Justin Lecher <j...@gentoo.org> +pymol-1.7.3.2.ebuild, + +files/pymol-9999-listing.patch, +files/pymol-9999-options.patch: + Version Bump *pymol-1.7.3.1 (17 Oct 2014) 1.1 sci-chemistry/pymol/pymol-1.7.3.2.ebuild file : http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/pymol-1.7.3.2.ebuild?rev=1.1&view=markup plain: http://sources.gentoo.org/viewvc.cgi/gentoo-x86/sci-chemistry/pymol/pymol-1.7.3.2.ebuild?rev=1.1&content-type=text/plain Index: pymol-1.7.3.2.ebuild =================================================================== # Copyright 1999-2014 Gentoo Foundation # Distributed under the terms of the GNU General Public License v2 # $Header: /var/cvsroot/gentoo-x86/sci-chemistry/pymol/pymol-1.7.3.2.ebuild,v 1.1 2014/10/20 18:05:38 jlec Exp $ EAPI=5 PYTHON_COMPAT=( python2_7 ) PYTHON_REQ_USE="tk" inherit distutils-r1 fdo-mime versionator DESCRIPTION="A Python-extensible molecular graphics system" HOMEPAGE="http://www.pymol.org/"; SRC_URI=" http://dev.gentoo.org/~jlec/distfiles/${PN}-1.7.0.0.png.xz http://dev.gentoo.org/~jlec/distfiles/${P}.tar.xz " # mirror://sourceforge/project/${PN}/${PN}/$(get_version_component_range 1-2)/${PN}-v${PV}.tar.bz2 # git archive -v --prefix=${P}/ master -o ${P}.tar.xz LICENSE="PSF-2.2" SLOT="0" KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos" IUSE="apbs web" DEPEND=" dev-python/numpy[${PYTHON_USEDEP}] dev-python/pmw[${PYTHON_USEDEP}] dev-python/pyopengl[${PYTHON_USEDEP}] media-libs/freetype:2 media-libs/glew media-libs/libpng media-video/mpeg-tools sys-libs/zlib media-libs/freeglut apbs? ( sci-chemistry/apbs sci-chemistry/pdb2pqr sci-chemistry/pymol-apbs-plugin[${PYTHON_USEDEP}] ) web? ( !dev-python/webpy[${PYTHON_USEDEP}] )" RDEPEND="${DEPEND}" S="${WORKDIR}"/${P}/${PN} PATCHES=( "${FILESDIR}"/${PN}-1.7.3.1-maeffplugin.cpp.patch "${FILESDIR}"/${PN}-9999-options.patch "${FILESDIR}"/${PN}-9999-listing.patch ) python_prepare_all() { sed \ -e "s:\"/usr:\"${EPREFIX}/usr:g" \ -e "/ext_comp_args.*+=/s:\[.*\]$:\[\]:g" \ -e "/import/s:argparse:argparseX:g" \ -i setup.py || die rm ./modules/pmg_tk/startup/apbs_tools.py || die sed \ -e "s:/opt/local:${EPREFIX}/usr:g" \ -e '/ext_comp_args/s:\[.*\]:[]:g' \ -i setup.py || die distutils-r1_python_prepare_all } python_install() { distutils-r1_python_install --pymol-path="${EPREFIX}/usr/share/pymol" } python_install_all() { distutils-r1_python_install_all python_export python2_7 EPYTHON # These environment variables should not go in the wrapper script, or else # it will be impossible to use the PyMOL libraries from Python. cat >> "${T}"/20pymol <<- EOF PYMOL_PATH="$(python_get_sitedir)/${PN}" PYMOL_DATA="${EPREFIX}/usr/share/pymol/data" PYMOL_SCRIPTS="${EPREFIX}/usr/share/pymol/scripts" EOF doenvd "${T}"/20pymol newicon "${WORKDIR}"/${PN}-1.7.0.0.png ${PN}.png make_desktop_entry ${PN} PyMol ${PN} \ "Graphics;Education;Science;Chemistry;" \ "MimeType=chemical/x-pdb;chemical/x-mdl-molfile;chemical/x-mol2;chemical/seq-aa-fasta;chemical/seq-na-fasta;chemical/x-xyz;chemical/x-mdl-sdf;" if ! use web; then rm -rf "${D}/$(python_get_sitedir)/web" || die fi rm -f "${ED}"/usr/share/${PN}/LICENSE || die } pkg_postinst() { fdo-mime_desktop_database_update fdo-mime_mime_database_update } pkg_postrm() { fdo-mime_desktop_database_update fdo-mime_mime_database_update }
