commit: a67a1c84befd9b4a6653b197d1f5686e223b7cbb Author: Horea Christian <chr <AT> chymera <DOT> eu> AuthorDate: Fri Oct 29 11:58:58 2021 +0000 Commit: Horea Christian <horea.christ <AT> gmail <DOT> com> CommitDate: Fri Oct 29 11:58:58 2021 +0000 URL: https://gitweb.gentoo.org/proj/sci.git/commit/?id=a67a1c84
dev-python/hdmf: new package (DANDI stack) Package-Manager: Portage-3.0.28, Repoman-3.0.3 Signed-off-by: Horea Christian <chr <AT> chymera.eu> .../hdmf/files/hdmf-3.1.1-new_jsonschema.patch | 10 +++++++ dev-python/hdmf/hdmf-3.1.1.ebuild | 32 ++++++++++++++++++++++ dev-python/hdmf/metadata.xml | 18 ++++++++++++ 3 files changed, 60 insertions(+) diff --git a/dev-python/hdmf/files/hdmf-3.1.1-new_jsonschema.patch b/dev-python/hdmf/files/hdmf-3.1.1-new_jsonschema.patch new file mode 100644 index 000000000..989332bb5 --- /dev/null +++ b/dev-python/hdmf/files/hdmf-3.1.1-new_jsonschema.patch @@ -0,0 +1,10 @@ +--- a/setup.py 2021-09-24 00:51:55.892741725 -0400 ++++ b/setup.py 2021-10-27 14:33:20.733741241 -0400 +@@ -23,7 +23,7 @@ + 'scipy>=1.1,<2', + 'pandas>=1.0.5,<2', + 'ruamel.yaml>=0.16,<1', +- 'jsonschema>=2.6.0,<4', ++ 'jsonschema>=2.6.0', + 'setuptools', + ] diff --git a/dev-python/hdmf/hdmf-3.1.1.ebuild b/dev-python/hdmf/hdmf-3.1.1.ebuild new file mode 100644 index 000000000..1731b0d90 --- /dev/null +++ b/dev-python/hdmf/hdmf-3.1.1.ebuild @@ -0,0 +1,32 @@ +# Copyright 1999-2021 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +PYTHON_COMPAT=( python3_{8..10} ) +DISTUTILS_USE_SETUPTOOLS=rdepend +inherit distutils-r1 + +DESCRIPTION="The Hierarchical Data Modeling Framework" +HOMEPAGE="https://github.com/hdmf-dev/hdmf" +SRC_URI="https://github.com/hdmf-dev/hdmf/releases/download/${PV}/${P}.tar.gz" + +SLOT="0" +LICENSE="BSD" +KEYWORDS="~amd64 ~x86" + +RDEPEND=" + dev-python/h5py[${PYTHON_USEDEP}] + dev-python/jsonschema[${PYTHON_USEDEP}] + dev-python/numpy[${PYTHON_USEDEP}] + dev-python/pandas[${PYTHON_USEDEP}] + dev-python/ruamel-yaml[${PYTHON_USEDEP}] + dev-python/scipy[${PYTHON_USEDEP}] + " +BDEPEND="" + +distutils_enable_tests pytest + +PATCHES=( + "${FILESDIR}/${PN}-3.1.1-new_jsonschema.patch" +) diff --git a/dev-python/hdmf/metadata.xml b/dev-python/hdmf/metadata.xml new file mode 100644 index 000000000..82da7c426 --- /dev/null +++ b/dev-python/hdmf/metadata.xml @@ -0,0 +1,18 @@ +<?xml version='1.0' encoding='UTF-8'?> +<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> +<pkgmetadata> + <maintainer type="person"> + <email>gen...@chymera.eu</email> + <name>Horea Christian</name> + </maintainer> + <maintainer type="project"> + <email>s...@gentoo.org</email> + <name>Gentoo Science Project</name> + </maintainer> + <longdescription lang="en"> + The Hierarchical Data Modeling Framework, or HDMF, is a Python package + for working with hierarchical data. It provides APIs for specifying + data models, reading and writing data to different storage backends, + and representing data with Python object. + </longdescription> +</pkgmetadata>