commit: 98306e9a97634769d6a038f8e9cf32db29f37882
Author: Sam James <sam <AT> gentoo <DOT> org>
AuthorDate: Sun Jun 26 07:11:08 2022 +0000
Commit: Sam James <sam <AT> gentoo <DOT> org>
CommitDate: Sun Jun 26 07:11:11 2022 +0000
URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=98306e9a
sci-libs/vtk: add 9.0.3-r5 w/ fixed gdal dep
Idea is to stable this w/ new GDAL.
See: 7fa499da25bf08098ba57a7421129c9288443de4
Signed-off-by: Sam James <sam <AT> gentoo.org>
sci-libs/vtk/vtk-9.0.3-r5.ebuild | 551 +++++++++++++++++++++++++++++++++++++++
1 file changed, 551 insertions(+)
diff --git a/sci-libs/vtk/vtk-9.0.3-r5.ebuild b/sci-libs/vtk/vtk-9.0.3-r5.ebuild
new file mode 100644
index 000000000000..0670773dab1b
--- /dev/null
+++ b/sci-libs/vtk/vtk-9.0.3-r5.ebuild
@@ -0,0 +1,551 @@
+# Copyright 1999-2022 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=7
+
+# TODO:
+# - add USE flag for remote modules? Those modules can be downloaded
+# properly before building.
+
+PYTHON_COMPAT=( python3_{8..10} )
+WEBAPP_OPTIONAL=yes
+WEBAPP_MANUAL_SLOT=yes
+
+inherit check-reqs cmake cuda flag-o-matic java-pkg-opt-2 python-single-r1
toolchain-funcs virtualx webapp
+
+# Short package version
+MY_PV="$(ver_cut 1-2)"
+
+DESCRIPTION="The Visualization Toolkit"
+HOMEPAGE="https://www.vtk.org/";
+SRC_URI="
+ https://www.vtk.org/files/release/${MY_PV}/VTK-${PV}.tar.gz
+ https://www.vtk.org/files/release/${MY_PV}/VTKData-${PV}.tar.gz
+ doc? (
https://www.vtk.org/files/release/${MY_PV}/vtkDocHtml-${PV}.tar.gz )
+ examples? (
https://www.vtk.org/files/release/${MY_PV}/VTKLargeData-${PV}.tar.gz )
+ test? (
+
https://www.vtk.org/files/release/${MY_PV}/VTKLargeData-${PV}.tar.gz
+ )
+"
+S="${WORKDIR}/VTK-${PV}"
+
+LICENSE="BSD LGPL-2"
+SLOT="0/${MY_PV}"
+KEYWORDS="~amd64 ~arm ~arm64 ~x86 ~amd64-linux ~x86-linux"
+# Note: external xdmf2 has no recognized target
+IUSE="+X all-modules boost cuda doc examples ffmpeg gdal imaging java
+ +json kits mpi mysql odbc offscreen openmp pegtl postgres python
+ qt5 +rendering tbb theora tk video_cards_nvidia views web"
+
+RESTRICT="!test? ( test )"
+
+REQUIRED_USE="
+ all-modules? ( boost ffmpeg gdal imaging mysql odbc postgres qt5
rendering theora views )
+ cuda? ( X video_cards_nvidia )
+ java? ( rendering )
+ python? ( ${PYTHON_REQUIRED_USE} )
+ qt5? ( X rendering )
+ tk? ( X rendering python )
+ web? ( python )
+ ^^ ( X offscreen )
+"
+
+RDEPEND="
+ app-arch/lz4
+ app-arch/xz-utils
+ dev-db/sqlite
+ dev-cpp/eigen[cuda?,openmp?]
+ dev-libs/double-conversion:=
+ dev-libs/expat
+ dev-libs/icu:=
+ dev-libs/libxml2:2
+ dev-libs/pugixml
+ media-libs/freetype
+ media-libs/libogg
+ media-libs/libpng
+ media-libs/libtheora
+ media-libs/tiff
+ <sci-libs/hdf5-1.12:=[mpi=]
+ sci-libs/kissfft[openmp?]
+ sci-libs/netcdf:=[mpi=]
+ sys-libs/zlib
+ media-libs/libjpeg-turbo
+ all-modules? ( sci-geosciences/liblas[gdal] )
+ boost? ( dev-libs/boost:=[mpi?] )
+ cuda? ( dev-util/nvidia-cuda-toolkit:= )
+ ffmpeg? ( media-video/ffmpeg:= )
+ gdal? ( sci-libs/gdal:= )
+ java? ( >=virtual/jdk-1.8:* )
+ json? ( dev-libs/jsoncpp:= )
+ mpi? (
+ sci-libs/h5part
+ sys-cluster/openmpi[cxx,romio]
+ )
+ mysql? ( dev-db/mariadb-connector-c )
+ odbc? ( dev-db/unixODBC )
+ offscreen? ( media-libs/mesa[osmesa] )
+ postgres? ( dev-db/postgresql:= )
+ python? ( ${PYTHON_DEPS} )
+ qt5? (
+ dev-qt/qtcore:5
+ dev-qt/qtsql:5
+ dev-qt/qtwidgets:5
+ )
+ rendering? (
+ media-libs/freeglut
+ media-libs/glew:=
+ <sci-libs/proj-8:=
+ virtual/opengl
+ x11-libs/gl2ps
+ )
+ tbb? ( <dev-cpp/tbb-2021:= )
+ tk? ( dev-lang/tk:= )
+ video_cards_nvidia? ( x11-drivers/nvidia-drivers[tools,static-libs] )
+ views? (
+ x11-libs/libICE
+ x11-libs/libXext
+ )
+ web? ( ${WEBAPP_DEPEND} )
+ python? (
+ $(python_gen_cond_dep '
+ boost? (
dev-libs/boost:=[mpi?,python?,${PYTHON_USEDEP}] )
+ mpi? ( dev-python/mpi4py[${PYTHON_USEDEP}] )
+ ')
+ gdal? ( sci-libs/gdal:=[python?,${PYTHON_SINGLE_USEDEP}] )
+ )
+"
+DEPEND="
+ ${RDEPEND}
+ dev-libs/jsoncpp
+ dev-libs/utfcpp
+ pegtl? ( <dev-libs/pegtl-3 )
+"
+BDEPEND="
+ mpi? ( app-admin/chrpath )
+ openmp? (
+ || (
+ sys-devel/gcc[openmp(+)]
+ sys-devel/clang-runtime[openmp(+)]
+ )
+ )
+"
+
+PATCHES=(
+
"${FILESDIR}"/${PN}-9.0.1-0001-fix-kepler-compute_arch-if-CUDA-toolkit-11-is-used.patch
+ "${FILESDIR}"/${PN}-8.2.0-freetype-2.10.3-provide-FT_CALLBACK_DEF.patch
+ "${FILESDIR}"/${PN}-9.0.1-limits-include-gcc11.patch
+ "${FILESDIR}"/${P}-IO-FFMPEG-support-FFmpeg-5.0-API-changes.patch
+)
+
+DOCS=( CONTRIBUTING.md README.md )
+
+CHECKREQS_DISK_BUILD="3G"
+
+pkg_pretend() {
+ if use examples; then
+ CHECKREQS_DISK_BUILD="4G"
+ fi
+ if use cuda; then
+ # NOTE: This should actually equal to (number of build jobs)*7G,
+ # as any of the cuda compile tasks can take up 7G!
+ # 10.2 GiB install directory, 6.4 GiB build directory with max.
USE flags
+ CHECKREQS_MEMORY="7G"
+ CHECKREQS_DISK_BUILD="14G"
+ fi
+ check-reqs_pkg_setup
+}
+
+pkg_setup() {
+ if use examples; then
+ CHECKREQS_DISK_BUILD="4G"
+ fi
+ if use cuda; then
+ CHECKREQS_MEMORY="7G"
+ CHECKREQS_DISK_BUILD="14G"
+ fi
+ check-reqs_pkg_setup
+
+ use java && java-pkg-opt-2_pkg_setup
+ use python && python-single-r1_pkg_setup
+ use web && webapp_pkg_setup
+}
+
+src_prepare() {
+ # If we have system libraries available use these and delete
+ # the respecting files in ${S}/ThirdParty to save some space.
+ # Note: libharu is omitted: vtk needs an updated version (2.4.0)
+ # Note: no valid xdmf2 targets are found for system xdmf2
+ # Note: no valid target found for h5part and mpi4py
+ # TODO: diy2 exodusII h5part libharu verdict vpic vtkm xdmf2 xdmf3 zfp
+ local -a DROPS=( doubleconversion eigen expat freetype gl2ps glew
+ hdf5 jpeg jsoncpp libproj libxml2 lz4 lzma netcdf ogg png
pugixml
+ sqlite theora tiff utf8 zlib )
+ use pegtl && DROPS+=( pegtl )
+
+ local x
+ for x in ${DROPS[@]}; do
+ ebegin "Dropping bundled ${x}"
+ rm -r ThirdParty/${x}/vtk${x} || die
+ eend $?
+ done
+ unset x
+
+ if use doc; then
+ einfo "Removing .md5 files from documents."
+ rm -f "${WORKDIR}"/html/*.md5 || die "Failed to remove
superfluous hashes"
+ sed -e "s|\${VTK_BINARY_DIR}/Utilities/Doxygen/doc|${WORKDIR}|"
\
+ -i Utilities/Doxygen/CMakeLists.txt || die
+ fi
+
+ cmake_src_prepare
+
+ if use cuda; then
+ cuda_add_sandbox -w
+ cuda_src_prepare
+ fi
+
+ if use test; then
+ ebegin "Copying data files to ${BUILD_DIR}"
+ mkdir -p "${BUILD_DIR}/ExternalData" || die
+ pushd "${BUILD_DIR}/ExternalData" >/dev/null || die
+ ln -sf ../../VTK-${PV}/.ExternalData/README.rst . || die
+ ln -sf ../../VTK-${PV}/.ExternalData/SHA512 . || die
+ popd >/dev/null || die
+ eend "$?"
+ fi
+}
+
+src_configure() {
+ local mycmakeargs=(
+# TODO: defaults for some variables to consider as USE flags
+# -DVTK_ANDROID_BUILD=OFF
+# -DVTK_BUILD_COMPILE_TOOLS_ONLY=OFF
+# -DVTK_ENABLE_LOGGING=ON
+# -DVTK_ENABLE_REMOTE_MODULES=ON
+# -DVTK_INSTALL_SDK=ON
+# -DVTK_IOS_BUILD=OFF
+# -DVTK_LEGACY_REMOVE=OFF
+# -DVTK_LEGACY_SILENT=OFF
+# -DVTK_WHEEL_BUILD=OFF
+
+ -DVTK_BUILD_ALL_MODULES=$(usex all-modules ON OFF)
+ # we use the pre-built documentation and install these with
USE=doc
+ -DVTK_BUILD_DOCUMENTATION=OFF
+ -DVTK_BUILD_EXAMPLES=$(usex examples ON OFF)
+
+ -DVTK_ENABLE_KITS=$(usex kits ON OFF)
+ # default to ON: USE flag for this?
+ -DVTK_ENABLE_REMOTE_MODULES=OFF
+
+ -DVTK_DATA_STORE="${S}/.ExternalData"
+
+ # Use upstream default, where USE flags are not given.
+ # Passing "DONT_WANT" will restrict building of modules from
+ # those groups and will severly limit the built libraries.
+ # Exceptions are MPI, where the default is "DONT_WANT" and
+ # StandAlone using "WANT".
+ -DVTK_GROUP_ENABLE_Imaging=$(usex imaging "WANT" "DEFAULT")
+ -DVTK_GROUP_ENABLE_Qt=$(usex qt5 "WANT" "DEFAULT")
+ -DVTK_GROUP_ENABLE_Rendering=$(usex rendering "WANT" "DEFAULT")
+ -DVTK_GROUP_ENABLE_StandAlone="WANT"
+ -DVTK_GROUP_ENABLE_Views=$(usex views "WANT" "DEFAULT")
+ -DVTK_GROUP_ENABLE_Web=$(usex web "WANT" "DEFAULT")
+
+ -DVTK_MODULE_ENABLE_VTK_vtkm="WANT"
+ -DVTK_MODULE_ENABLE_VTK_AcceleratorsVTKm="WANT"
+
+ -DVTK_PYTHON_VERSION="3"
+ -DVTK_RELOCATABLE_INSTALL=ON
+
+ -DVTK_USE_CUDA=$(usex cuda ON OFF)
+ # use system libraries where possible
+ -DVTK_USE_EXTERNAL=ON
+ -DVTK_USE_MPI=$(usex mpi ON OFF)
+ -DVTK_USE_TK=$(usex tk ON OFF)
+ -DVTK_USE_X=$(usex X ON OFF)
+
+ -DVTK_VERSIONED_INSTALL=ON
+
+ -DVTK_WRAP_JAVA=$(usex java ON OFF)
+ -DVTK_WRAP_PYTHON=$(usex python ON OFF)
+ )
+
+ if use examples || use test; then
+ mycmakeargs+=( -DVTK_USE_LARGE_DATA=ON )
+ fi
+
+ if ! use java && ! use python; then
+ # defaults to ON
+ mycmakeargs+=( -DVTK_ENABLE_WRAPPING=OFF )
+ fi
+
+ if use boost; then
+ mycmakeargs+=(
+ -DVTK_MODULE_ENABLE_VTK_InfovisBoost="WANT"
+
-DVTK_MODULE_ENABLE_VTK_InfovisBoostGraphAlgorithms="WANT"
+ )
+ fi
+
+ if use cuda; then
+ local cuda_arch=
+ case ${VTK_CUDA_ARCH:-native} in
+ # we ignore fermi arch, because current
nvidia-cuda-toolkit-11*
+ # no longer supports it
+ kepler|maxwell|pascal|volta|turing|ampere|all)
+ cuda_arch=${VTK_CUDA_ARCH}
+ ;;
+ native)
+ ewarn "If auto detection fails for you, please
try and export the"
+ ewarn "VTK_CUDA_ARCH environment variable to
one of the common arch"
+ ewarn "names: kepler, maxwell, pascal, volta,
turing, ampere or all."
+ cuda_arch=native
+ ;;
+ *)
+ eerror "Please properly set the VTK_CUDA_ARCH
environment variable to"
+ eerror "one of: kepler, maxwell, pascal, volta,
turing, ampere, all"
+ die "Invalid CUDA architecture given:
'${VTK_CUDA_ARCH}'!"
+ ;;
+ esac
+ ewarn "Using CUDA architecture '${cuda_arch}'"
+
+ mycmakeargs+=( -DVTKm_CUDA_Architecture=${cuda_arch} )
+ fi
+
+ if use ffmpeg; then
+ mycmakeargs+=( -DVTK_MODULE_ENABLE_VTK_IOFFMPEG="WANT" )
+ fi
+
+ if use gdal; then
+ mycmakeargs+=( -DVTK_MODULE_ENABLE_VTK_GeovisGDAL="WANT" )
+ fi
+
+ if use java; then
+ mycmakeargs+=(
+ -DCMAKE_INSTALL_JARDIR="share/${PN}"
+ -DVTK_ENABLE_WRAPPING=ON
+ )
+ fi
+
+ if use json; then
+ mycmakeargs+=( -DVTK_MODULE_ENABLE_VTK_IOGeoJSON="WANT" )
+ fi
+
+ if use mpi; then
+ mycmakeargs+=(
+ -DVTK_GROUP_ENABLE_MPI="WANT"
+ -DVTK_MODULE_ENABLE_VTK_IOH5part="WANT"
+ -DVTK_MODULE_ENABLE_VTK_IOParallel="WANT"
+ -DVTK_MODULE_ENABLE_VTK_IOParallelNetCDF="WANT"
+ -DVTK_MODULE_ENABLE_VTK_IOParallelXML="WANT"
+ -DVTK_MODULE_ENABLE_VTK_ParallelMPI="WANT"
+ -DVTK_MODULE_ENABLE_VTK_RenderingParallel="WANT"
+ -DVTK_MODULE_ENABLE_VTK_h5part="WANT"
+ -DVTKm_ENABLE_MPI=ON
+ )
+ if use python; then
+ mycmakeargs+=(
-DVTK_MODULE_ENABLE_VTK_ParallelMPI4Py="WANT" )
+ fi
+ fi
+
+ if use mysql; then
+ mycmakeargs+=(
+ -DVTK_MODULE_ENABLE_VTK_IOMySQL="WANT"
+ -DVTK_MODULE_ENABLE_VTK_IOSQL="WANT"
+ )
+ fi
+
+ if use odbc; then
+ mycmakeargs+=( -DVTK_MODULE_ENABLE_VTK_IOODBC="WANT" )
+ fi
+
+ if use offscreen; then
+ mycmakeargs+=(
+ -DVTK_DEFAULT_RENDER_WINDOW_OFFSCREEN=ON
+ -DVTK_DEFAULT_RENDER_WINDOW_HEADLESS=ON
+ -DVTK_OPENGL_HAS_OSMESA=ON
+ )
+ fi
+
+ if use openmp; then
+ if use tbb; then
+ einfo "NOTE: You have specified both openmp and tbb USE
flags."
+ einfo "NOTE: Tbb will take precedence. Disabling OpenMP"
+ # Sequential is default SMP implementation, nothing
special to do
+ else
+ mycmakeargs+=(
+ -DVTK_SMP_IMPLEMENTATION_TYPE="OpenMP"
+ -DVTKm_ENABLE_OPENMP=ON
+ )
+ fi
+ fi
+
+ if use pegtl; then
+ mycmakeargs+=( -DVTK_MODULE_USE_EXTERNAL_VTK_pegtl=ON )
+ else
+ mycmakeargs+=( -DVTK_MODULE_USE_EXTERNAL_VTK_pegtl=OFF )
+ fi
+
+ if use postgres; then
+ mycmakeargs+=(
+ -DVTK_MODULE_ENABLE_VTK_IOPostgreSQL="WANT"
+ -DVTK_MODULE_ENABLE_VTK_IOSQL="WANT"
+ )
+ fi
+
+ if use python; then
+ mycmakeargs+=(
+ -DVTK_ENABLE_WRAPPING=ON
+ -DPython3_EXECUTABLE="${PYTHON}"
+
-DVTK_PYTHON_SITE_PACKAGES_SUFFIX="lib/${EPYTHON}/site-packages"
+ )
+ fi
+
+ if use qt5; then
+ mycmakeargs+=( -DVTK_MODULE_ENABLE_VTK_GUISupportQt="WANT" )
+ if use mysql || use postgres; then
+ mycmakeargs+=(
-DVTK_MODULE_ENABLE_VTK_GUISupportQtSQL="WANT" )
+ fi
+ if use rendering; then
+ mycmakeargs+=(
-DVTK_MODULE_ENABLE_VTK_RenderingQt="WANT" )
+ fi
+ if use views; then
+ mycmakeargs+=( -DVTK_MODULE_ENABLE_VTK_ViewsQt="WANT" )
+ fi
+ fi
+
+ if use rendering || use web || use all-modules; then
+ # needs patched version
+ mycmakeargs+=( -DVTK_MODULE_USE_EXTERNAL_VTK_libharu=OFF )
+ fi
+
+ if use rendering; then
+ mycmakeargs+=(
+ -DVTK_MODULE_ENABLE_VTK_IOExportGL2PS="WANT"
+ -DVTK_MODULE_USE_EXTERNAL_VTK_gl2ps=ON
+ -DVTK_MODULE_USE_EXTERNAL_VTK_glew=ON
+ -DVTK_MODULE_USE_EXTERNAL_VTK_libproj=ON
+ )
+ fi
+
+ if use tbb; then
+ mycmakeargs+=(
+ -DVTK_SMP_IMPLEMENTATION_TYPE="TBB"
+ -DVTKm_ENABLE_TBB=ON
+ )
+ fi
+
+ if use test; then
+ ewarn "Testing requires VTK_FORBID_DOWNLOADS=OFF by upstream."
+ ewarn "Care has been taken to pre-download all required files."
+ ewarn "In case you find missing files, please inform me."
+ mycmakeargs+=(
+ -DVTK_BUILD_TESTING=ON
+ -DVTK_DATA_EXCLUDE_FROM_ALL=ON
+ -DVTK_FORBID_DOWNLOADS=OFF
+ )
+ else
+ mycmakeargs+=(
+ -DVTK_BUILD_TESTING=OFF
+ -DVTK_FORBID_DOWNLOADS=ON
+ )
+ fi
+
+ if use theora; then
+ mycmakeargs+=( -DVTK_MODULE_ENABLE_VTK_IOOggTheora="WANT" )
+ fi
+
+ if use all-modules; then
+ mycmakeargs+=(
+ -DVTK_ENABLE_OSPRAY=OFF
+ -DVTK_MODULE_ENABLE_VTK_DomainsMicroscopy="DONT_WANT"
+ -DVTK_MODULE_ENABLE_VTK_FiltersOpenTURNS="DONT_WANT"
+ -DVTK_MODULE_ENABLE_VTK_IOADIOS2="DONT_WANT"
+ -DVTK_MODULE_ENABLE_VTK_IOPDAL="DONT_WANT"
+ -DVTK_MODULE_ENABLE_VTK_MomentInvariants="DONT_WANT"
+
-DVTK_MODULE_ENABLE_VTK_PoissonReconstruction="DONT_WANT"
+ -DVTK_MODULE_ENABLE_VTK_Powercrust="DONT_WANT"
+ -DVTK_MODULE_ENABLE_VTK_RenderingOpenVR="DONT_WANT"
+ -DVTK_MODULE_ENABLE_VTK_SignedTensor="DONT_WANT"
+
-DVTK_MODULE_ENABLE_VTK_SplineDrivenImageSlicer="DONT_WANT"
+ -DVTK_MODULE_ENABLE_VTK_vtkDICOM="DONT_WANT"
+ -DVTK_MODULE_USE_EXTERNAL_vtkkissfft=ON
+ )
+ fi
+
+ use java && export
JAVA_HOME="${EPREFIX}/etc/java-config-2/current-system-vm"
+
+ if use mpi; then
+ export CC=mpicc
+ export CXX=mpicxx
+ export FC=mpif90
+ export F90=mpif90
+ export F77=mpif77
+ fi
+
+ cmake_src_configure
+}
+
+src_test() {
+ nonfatal virtx cmake_src_test
+}
+
+src_install() {
+ use web && webapp_src_preinst
+
+ # Stop web page images from being compressed
+ if use doc; then
+ HTML_DOCS=( "${WORKDIR}/html/." )
+ fi
+
+ cmake_src_install
+
+ use java && java-pkg_regjar "${ED}"/usr/share/${PN}/${PN}.jar
+
+ # install examples
+ if use examples; then
+ einfo "Installing examples"
+ mv -v {E,e}xamples || die
+ dodoc -r examples
+ docompress -x /usr/share/doc/${PF}/examples
+
+ einfo "Installing datafiles"
+ insinto /usr/share/${PN}/data
+ doins -r "${S}/.ExternalData"
+ fi
+
+ # with MPI runpath's are not deleted properly
+ if use mpi; then
+ chrpath -d "${ED}"/usr/$(get_libdir)/*.so.${PV} || die
+ fi
+
+ use python && python_optimize
+
+ # environment
+ cat >> "${T}"/40${PN} <<- EOF || die
+ VTK_DATA_ROOT=${EPREFIX}/usr/share/${PN}/data
+ VTK_DIR=${EPREFIX}/usr/$(get_libdir)/${PN}
+ VTKHOME=${EPREFIX}/usr
+ EOF
+ doenvd "${T}"/40${PN}
+
+ use web && webapp_src_install
+
+ # Temporary!
+ # Avoid collision with paraview.
+ # bug #793221
+ rm -rf "${ED}"/usr/share/vtkm-1.5/VTKm{LICENSE.txt,README.md} || die
+}
+
+# webapp.eclass exports these but we want it optional #534036
+pkg_postinst() {
+ use web && webapp_pkg_postinst
+
+ if use examples; then
+ einfo "You can get more and updated examples at"
+ einfo "https://kitware.github.io/vtk-examples/site/";
+ fi
+}
+
+pkg_prerm() {
+ use web && webapp_pkg_prerm
+}
