commit: 05f1ec32b757a08781ce81f883ec0873b7ee6d99 Author: Pacho Ramos <pacho <AT> gentoo <DOT> org> AuthorDate: Fri Oct 20 12:11:55 2023 +0000 Commit: Pacho Ramos <pacho <AT> gentoo <DOT> org> CommitDate: Fri Oct 20 13:14:37 2023 +0000 URL: https://gitweb.gentoo.org/repo/gentoo.git/commit/?id=05f1ec32
sci-chemistry/gromacs: Fix compilation with gcc-13 Closes: https://bugs.gentoo.org/915694 Signed-off-by: Pacho Ramos <pacho <AT> gentoo.org> .../gromacs/files/gromacs-2021-cstdint-include.patch | 12 ++++++++++++ sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild | 1 + 2 files changed, 13 insertions(+) diff --git a/sci-chemistry/gromacs/files/gromacs-2021-cstdint-include.patch b/sci-chemistry/gromacs/files/gromacs-2021-cstdint-include.patch new file mode 100644 index 000000000000..5952aa3dd8e8 --- /dev/null +++ b/sci-chemistry/gromacs/files/gromacs-2021-cstdint-include.patch @@ -0,0 +1,12 @@ +# https://bugs.gentoo.org/915694 +# Not needed for newer branches, that greatly refactored the code +--- a/src/gromacs/utility/flags.h~ 2023-01-31 12:45:46.000000000 +0100 ++++ b/src/gromacs/utility/flags.h 2023-10-16 10:15:24.087340444 +0200 +@@ -42,7 +42,7 @@ + */ + #ifndef GMX_UTILITY_FLAGS_H + #define GMX_UTILITY_FLAGS_H +- ++#include <cstdint> + namespace gmx + { diff --git a/sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild b/sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild index f209fdeadb3e..ba32eebe7d85 100644 --- a/sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild +++ b/sci-chemistry/gromacs/gromacs-2021.7-r1.ebuild @@ -88,6 +88,7 @@ RESTRICT="!test? ( test )" PATCHES=( "${FILESDIR}/${PN}-2021-musl-stdint.patch" "${FILESDIR}/${PN}-2021-cuda-detection.patch" + "${FILESDIR}/${PN}-2021-cstdint-include.patch" ) if [[ ${PV} != *9999 ]]; then
