commit: 0e022df74f7743c179892b2d68d693ac4031c880 Author: Ted Tanberry <ted.tanberry <AT> gmail <DOT> com> AuthorDate: Fri Feb 6 08:59:48 2015 +0000 Commit: Christoph Junghans <ottxor <AT> gentoo <DOT> org> CommitDate: Fri Feb 6 08:59:48 2015 +0000 URL: http://sources.gentoo.org/gitweb/?p=proj/sci.git;a=commit;h=0e022df7
Amended bwa ebuild to remove base.eclass --- sci-biology/bwa/bwa-0.7.12.ebuild | 19 +++++++++++-------- 1 file changed, 11 insertions(+), 8 deletions(-) diff --git a/sci-biology/bwa/bwa-0.7.12.ebuild b/sci-biology/bwa/bwa-0.7.12.ebuild index 353c4bf..62488f3 100644 --- a/sci-biology/bwa/bwa-0.7.12.ebuild +++ b/sci-biology/bwa/bwa-0.7.12.ebuild @@ -4,7 +4,7 @@ EAPI=5 -inherit base toolchain-funcs +inherit eutils toolchain-funcs DESCRIPTION="Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner" HOMEPAGE="http://bio-bwa.sourceforge.net/"; @@ -17,15 +17,18 @@ KEYWORDS="~amd64 ~x86 ~x64-macos" PATCHES=( "${FILESDIR}"/${PN}_Makefile.patch ) -src_compile() { +src_prepare() { + epatch ${PATCHES[@]} tc-export CC AR - default } src_install() { - dobin bwa || die - doman bwa.1 || die - exeinto /usr/share/${PN} - doexe qualfa2fq.pl xa2multi.pl || die - dodoc NEWS.md README-alt.md README.md || die + dobin bwa + + doman bwa.1 + + exeinto /usr/libexec/${PN} + doexe qualfa2fq.pl xa2multi.pl + + dodoc NEWS.md README-alt.md README.md }
