O , 2011-10-11 11:42 +0700, Andrey G. Grozin rakstīja:
> Hello *,
>
> I use the science overlay, and for quite some time I have problems with
> blas/lapack. Each attempt to emerge -uD @world produces something like
>
> ================================================================================
> [blocks B ] app-admin/eselect-blas ("app-admin/eselect-blas" is
> blocking sci-libs/lapack-reference-3.3.1-r1, sci-libs/gsl-1.15-r1,
> sci-libs/blas-reference-20110418)
> [blocks B ] app-admin/eselect-cblas ("app-admin/eselect-cblas" is
> blocking sci-libs/lapack-reference-3.3.1-r1, sci-libs/gsl-1.15-r1,
> sci-libs/blas-reference-20110418)
> [blocks B ] app-admin/eselect-lapack ("app-admin/eselect-lapack" is
> blocking sci-libs/lapack-reference-3.3.1-r1, sci-libs/gsl-1.15-r1,
> sci-libs/blas-reference-20110418)
>
> Total: 21 packages (21 upgrades), Size of downloads: 19,795 kB
> Conflict: 4 blocks (3 unsatisfied)
> Portage tree and overlays:
> [0] /usr/portage
> [1] /var/lib/layman/science
>
> * Error: The above package list contains packages which cannot be
> * installed at the same time on the same system.
>
> (sci-libs/lapack-reference-3.3.1-r1::science, ebuild scheduled for
> merge) pulled in by
> >=sci-libs/lapack-reference-3.3 required by
> (virtual/lapack-3.3::science, ebuild scheduled for merge)
>
> (app-admin/eselect-cblas-0.1::gentoo, installed) pulled in by
> app-admin/eselect-cblas required by
> (sci-libs/blas-atlas-3.9.23-r4::gentoo, installed)
>
> (sci-libs/blas-reference-20110418::science, ebuild scheduled for merge)
> pulled in by
> >=sci-libs/blas-reference-20110417 required by
> (virtual/blas-2.1::science, ebuild scheduled for merge)
>
> (app-admin/eselect-blas-0.1::gentoo, installed) pulled in by
> app-admin/eselect-blas required by
> (sci-libs/blas-atlas-3.9.23-r4::gentoo, installed)
>
> (sci-libs/gsl-1.15-r1::science, ebuild scheduled for merge) pulled in by
> sci-libs/gsl required by (sci-mathematics/giac-0.9.3::grozin,
> installed)
> sci-libs/gsl required by (sci-libs/mathgl-1.11.2::gentoo, installed)
> sci-libs/gsl required by (sci-libs/tamu_anova-0.2.1::gentoo,
> installed)
> sci-libs/gsl required by (sci-visualization/qtiplot-0.9.8.8::gentoo,
> installed)
> sci-libs/gsl required by (media-gfx/asymptote-2.13::grozin, installed)
> sci-libs/gsl required by (media-gfx/inkscape-0.48.2::gentoo,
> installed)
> sci-libs/gsl required by (app-office/kspread-2.3.3::gentoo, installed)
> >=sci-libs/gsl-1.10 required by
> (sci-visualization/pyxplot-0.8.4::gentoo, installed)
> >=sci-libs/gsl-1.14-r2 required by (virtual/cblas-2.0::science, ebuild
> scheduled for merge)
>
> (app-admin/eselect-lapack-0.1::gentoo, installed) pulled in by
> app-admin/eselect-lapack required by
> (sci-libs/lapack-atlas-3.9.23-r3::gentoo, installed)
> ================================================================================
> Any ideas?
>
> Andrey
>
Hi!
You have to resolve the blockers:
- Unmerge blas-atlas, lapack-atlas, eselect-{blas,cblas,lapack}
- Upgrade world
- Emerge sci-libs/atlas
- Eselect your blas, cblas, lapack implementations
- To be sure that all links properly, run revdep-rebuild
If eselect fails complaining that some file is not a symlink, run:
emerge -1 atlas gsl lapack-reference blas-reference
Alter that eselecting should work without errors.
If you do not want atlas versions of blas, cblas and lapack, you can
skip the step where atlas is installed.
Reinis
