Quoting Thomas Kahle <[email protected]>:
On 17:27 Wed 30 May 2012, P Purkayastha wrote:
On 05/30/2012 05:07 PM, Thomas Kahle wrote:
> Hi,
> I'm trying to build sage on gentoo but I get a conflict:
>
> !!! Multiple package instances within a single package slot have
been pulled
> !!! into the dependency graph, resulting in a slot conflict:
>
> dev-python/numpy:0
>
> (dev-python/numpy-1.5.1::sage-on-gentoo, ebuild scheduled for
merge) pulled in by
> ~dev-python/numpy-1.5.1 required by
(sci-mathematics/sage-5.0-r1::sage-on-gentoo, ebuild scheduled for
merge)
>
> (dev-python/numpy-1.6.0::gentoo, ebuild scheduled for merge)
pulled in by
> >=dev-python/numpy-1.5[lapack] required by
(sci-libs/scipy-0.9.0-r1::gentoo, ebuild scheduled for merge)
>
> Any suggestions?
>
> Thanks!
> Thomas
>
The latter package scipy depends on >=numpy-1.5 whereas sage depends
on =numpy-1.5.1. So, simply mask the higher versions of numpy:
If you have /etc/portage/package.mask directory then,
echo ">dev-python/numpy-1.5.1" >> /etc/portage/package.mask/mask_numpy
otherwise
echo ">dev-python/numpy-1.5.1" >> /etc/portage/package.mask
... and now it pulls in eselect-cblas and gsl which are blocking each other:
[blocks B ] app-admin/eselect-cblas ("app-admin/eselect-cblas"
is blocking sci-libs/gsl-1.15-r2)
* Error: The above package list contains packages which cannot be
* installed at the same time on the same system.
(app-admin/eselect-cblas-0.1::gentoo, ebuild scheduled for merge)
pulled in by
app-admin/eselect-cblas required by
(sci-libs/cblas-reference-20030223-r4::gentoo, ebuild scheduled for
merge)
(sci-libs/gsl-1.15-r2::science, installed) pulled in by
sci-libs/gsl required by (media-gfx/inkscape-0.48.2::gentoo, installed)
>=sci-libs/gsl-1.15 required by
(sci-mathematics/sage-5.0-r1::sage-on-gentoo, ebuild scheduled for
merge)
I think that's a different problem. You are using blas stuff from the science
overlay but the version of cblas-reference from the main tree as a higher
version number than the one from the science overlay (3. something?). So you
probably have to mask sci-libs/cblas-reference::gentoo.
For your original problem, yes portage should solve the conflict, this is very
strange, are numpy or scipy part of your world file?
Francois
