Got that problem too. My solution for that kind of problem is
layman -d …
layman -a …
and everything usually is back to normal.

> On 15/01/2018, at 23:29, [email protected] wrote:
> 
> Hello *,
> 
> For a couple of days I cannot sync the overlay:
> 
> dns ~ # layman -s science
> 
> * Fetching remote list...
> * Fetch Ok
> 
> * Syncing selected overlay(s)...
> * Running Git... # ( cd /var/lib/layman/science  && /usr/bin/git pull )
> Warning: untrusted X11 forwarding setup failed: xauth key data not generated
> error: cannot lock ref 'refs/remotes/origin/jlec/scilab': 
> 'refs/remotes/origin/jlec' exists; cannot create 
> 'refs/remotes/origin/jlec/scilab'
> From git+ssh://git.gentoo.org/proj/sci
> ! [new branch]          jlec/scilab -> origin/jlec/scilab  (unable to update 
> local ref)
> * Failure result returned from Git
> *
> * Errors:
> * ------
> * Failed to sync overlay "science".
> * Error was: Syncing overlay "science" returned status 1!
> * db.sync()
> *
> 
> * CLI: Errors occurred processing action sync
> *
> * Errors:
> * ------
> * Failed to sync overlay "science".
> * Error was: Syncing overlay "science" returned status 1!
> * db.sync()
> 
> What has changed?
> 
> Andrey
> 


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