Dear Pierre This is how I compile sequential getfem on our cluster (running some version of Scientific Linux):
I put all dependencies (symbolic links actually) into two folders: /some_path_with_dependencies/lib /some_path_with_dependencies/include then I configure getfem with ./configure --prefix=/some_installation_path/getfemseq BLAS_LIBS=-L/some_path_with_dependencies/lib -lopenblas -lpthread CPPFLAGS=-I/some_path_with_dependencies/include LDFLAGS=-L/some_path_with_dependencies/deps/lib LIBS="-lmumps_common -lpord -lmpiseq -lmetis -lesmumps -lscotch -lscotcherr -lpthread -lgfortran" --with-optimization=-O2 --with-pic --disable-matlab --enable-python --enable-mumps My "include" and "lib" dependencies folders contain: [image: image.png][image: image.png] This is the minimal amount of files that GetFEM links to. Depending on how you compile mumps, you might get slightly different dependencies, but I think you get the idea. If you are still stuck after this, just let me know and I can tell you how to debug the configure error more systematically. Best regards Kostas On Mon, May 24, 2021 at 6:32 PM edgar <edgar...@cryptolab.net> wrote: > Hi, Pierre. Disclaimer: I haven't been able to compile the test suite > correctly (take my advice with reserves). > > The sequential libraries of MUMPS usually have _seq before the .o . I > can imagine that you already checked that you have the right libraries. > By the looks of it, you are using the parallel version, but I don't dare > to draw such conclusion. This comes from the configure file, and you > might want to try it: > > "-lsmumps_seq -ldmumps_seq -lcmumps_seq -lzmumps_seq" > > I remember that I was able to hijack the library files with a variable > (MUMPS_LIBS?), but I am sure that the developers will have much better > advice than this. > > Bonne chance! > > On 2021-05-24 15:48, pierre.gosselet wrote: > > Dear all, > > I am working on a cluster and I need to compile getfem and most of its > > dependency. > > > > I have a hard time compiling the mumps support. I know close questions > > were already asked but I did not find the answer. Sorry if I missed it. > > > > I compiled sequential mumps without trouble, examples work fine. > > > > I tried to configure getfem with: > > ./configure --enable-mumps --with-mumps-include- > > dir="$MUMPS_DIR/include" --with-mumps="-fopenmp -lsmumps -lmumps_common > > -ldmumps -lcmumps -lzmumps -lpord -lesmumps -lscotch -lscotcherr - > > llapack -lmpiseq -lblas -lpthread" --with-pic > > > > I always have the following problem: > > checking for library containing smumps_c... no > > configure: error: The function smumps_c couldn't be found in the > > provided MUMPS libraries. > > > > The --with-mumps is inspired by the compilation line for mumps examples > > (I have copied the libseq includes file in the include directory). > > All the libraries are in the $LD_LIBRARY_PATH, but I also tried with > > the full path. $MUMPS_DIR is well defined. I also tried with the mumps > > module provided by the cluster's administrator (with adapted include), > > same problem. > > > > Can anyone help me ? > > > > best regards > > pierre > >
