> @@ -1122,6 +1124,7 @@ static int do_fetch(struct transport *transport,
>       int autotags = (transport->remote->fetch_tags == 1);
>       int retcode = 0;
>       const struct ref *remote_refs;
> +     struct ref *new_remote_refs = NULL;

Above, you use the name "updated_remote_refs" - it's probably better to
standardize on one. I think "updated" is better.

(The transport calling it "fetched_refs" is fine, because that's what
they are from the perspective of the transport. From the perspective of
fetch-pack, it is indeed a new or updated set of remote refs.)

> -     if (fetch_refs(transport, ref_map) || consume_refs(transport, ref_map)) 
> {
> +
> +     if (fetch_refs(transport, ref_map, &new_remote_refs)) {
> +             free_refs(ref_map);
> +             retcode = 1;
> +             goto cleanup;
> +     }
> +     if (new_remote_refs) {
> +             free_refs(ref_map);
> +             ref_map = get_ref_map(transport->remote, new_remote_refs, rs,
> +                                   tags, &autotags);
> +             free_refs(new_remote_refs);
> +     }
> +     if (consume_refs(transport, ref_map)) {
>               free_refs(ref_map);
>               retcode = 1;
>               goto cleanup;

Here, if we got updated remote refs, we need to regenerate ref_map,
since it is the source of truth.

Maybe add a comment in the "if (new_remote_refs)" block explaining this
- something like: Regenerate ref_map using the updated remote refs,
because the transport would place shallow (and other) information
there.

> -             for (i = 0; i < nr_sought; i++)
> +             for (r = refs; r; r = r->next, i++)
>                       if (status[i])
> -                             sought[i]->status = REF_STATUS_REJECT_SHALLOW;
> +                             r->status = REF_STATUS_REJECT_SHALLOW;

You use i here without initializing it to 0. t5703 also fails with this
patch - probably related to this, but I didn't check.

If you initialize i here, I don't think you need to initialize it to 0
at the top of this function.

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