ahmedabu98 opened a new issue, #28635: URL: https://github.com/apache/beam/issues/28635
### What happened? Looks like both `testFhirIOSearchWithGenericParameters` and `testFhirIOSearch` are failing due to OOM errors. Seeing these errors very frequently when running `Java_GCP_IO_Direct` on Github Actions but not so much for the Jenkins jobs. Example runs: https://github.com/apache/beam/actions/runs/6281472530/job/17059883679?pr=28634, https://github.com/apache/beam/actions/runs/6278950376/job/17053724245?pr=28631 Not to say it doesn't happen on Jenkins ([see this failing test](https://ci-beam.apache.org/job/beam_PreCommit_Java_GCP_IO_Direct_Cron/1782/testReport/)), just not seeing it as much Stacktrace dump for testFhirIOSearch: ``` com.google.gson.JsonParseException: Failed parsing JSON source: JsonReader at line 1 column 518561 path $[121].resource.item[1].adjudication[1].category.coding[0].code to Json at com.google.gson.JsonParser.parseReader(JsonParser.java:106) at com.google.gson.JsonParser.parseReader(JsonParser.java:70) at com.google.gson.JsonParser.parseString(JsonParser.java:51) at org.apache.beam.sdk.io.gcp.healthcare.JsonArrayCoder.decode(JsonArrayCoder.java:46) at org.apache.beam.sdk.io.gcp.healthcare.JsonArrayCoder.decode(JsonArrayCoder.java:28) at org.apache.beam.sdk.coders.Coder.decode(Coder.java:154) at org.apache.beam.sdk.coders.KvCoder.decode(KvCoder.java:84) at org.apache.beam.sdk.coders.KvCoder.decode(KvCoder.java:37) at org.apache.beam.sdk.util.CoderUtils.decodeFromSafeStream(CoderUtils.java:142) at org.apache.beam.sdk.util.CoderUtils.decodeFromByteArray(CoderUtils.java:102) at org.apache.beam.sdk.util.CoderUtils.decodeFromByteArray(CoderUtils.java:96) at org.apache.beam.sdk.util.CoderUtils.clone(CoderUtils.java:168) at org.apache.beam.sdk.util.MutationDetectors$CodedValueMutationDetector.verifyUnmodifiedThrowingCheckedExceptions(MutationDetectors.java:139) at org.apache.beam.sdk.util.MutationDetectors$CodedValueMutationDetector.verifyUnmodified(MutationDetectors.java:128) at org.apache.beam.runners.direct.ImmutabilityEnforcementFactory$ImmutabilityCheckingEnforcement.verifyUnmodified(ImmutabilityEnforcementFactory.java:146) at org.apache.beam.runners.direct.ImmutabilityEnforcementFactory$ImmutabilityCheckingEnforcement.afterElement(ImmutabilityEnforcementFactory.java:131) at org.apache.beam.runners.direct.DirectTransformExecutor.processElements(DirectTransformExecutor.java:175) at org.apache.beam.runners.direct.DirectTransformExecutor.run(DirectTransformExecutor.java:129) at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511) at java.util.concurrent.FutureTask.run(FutureTask.java:266) at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149) at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624) at java.lang.Thread.run(Thread.java:750) Caused by: java.lang.OutOfMemoryError: GC overhead limit exceeded at java.util.Arrays.copyOfRange(Arrays.java:3664) at java.lang.String.<init>(String.java:207) at com.google.gson.stream.JsonReader.nextQuotedValue(JsonReader.java:1014) at com.google.gson.stream.JsonReader.nextName(JsonReader.java:798) at com.google.gson.internal.bind.TypeAdapters$28.read(TypeAdapters.java:783) at com.google.gson.internal.bind.TypeAdapters$28.read(TypeAdapters.java:725) at com.google.gson.internal.Streams.parse(Streams.java:49) at com.google.gson.JsonParser.parseReader(JsonParser.java:102) ``` ### Issue Failure Failure: Test is flaky ### Issue Priority Priority: 2 (backlog / disabled test but we think the product is healthy) ### Issue Components - [ ] Component: Python SDK - [X] Component: Java SDK - [ ] Component: Go SDK - [ ] Component: Typescript SDK - [X] Component: IO connector - [ ] Component: Beam examples - [ ] Component: Beam playground - [ ] Component: Beam katas - [ ] Component: Website - [ ] Component: Spark Runner - [ ] Component: Flink Runner - [ ] Component: Samza Runner - [ ] Component: Twister2 Runner - [ ] Component: Hazelcast Jet Runner - [ ] Component: Google Cloud Dataflow Runner -- This is an automated message from the Apache Git Service. To respond to the message, please log on to GitHub and use the URL above to go to the specific comment. To unsubscribe, e-mail: [email protected] For queries about this service, please contact Infrastructure at: [email protected]
